RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W HEM14P40012 539 aa1.17□□□□□ -2.22
MSN5YDR335W PHM8P40025 321 aa1.17□□□□□ -2.22
MSN5YDR335W YMR144WP40214 342 aaKnown RBP1.17□□□□□ -2.22
MSN5YDR335W BMT5P40493 336 aa1.17□□□□□ -2.22
MSN5YDR335W ERG10P41338 398 aaKnown RBP1.17□□□□□ -2.22
MSN5YDR335W SWC4P53201 476 aa1.17□□□□□ -2.22
MSN5YDR335W IRC15Q02733 499 aa1.17□□□□□ -2.22
MSN5YDR335W YDR476CQ03362 224 aa1.17□□□□□ -2.22
MSN5YDR335W SLD5Q03406 294 aa1.17□□□□□ -2.22
MSN5YDR335W AIM34Q03673 198 aa1.17□□□□□ -2.22
MSN5YDR335W RPN8Q08723 338 aaKnown RBP1.17□□□□□ -2.22
MSN5YDR335W YPL278CQ08990 100 aa1.17□□□□□ -2.22
MSN5YDR335W ACF2Q12168 779 aa1.17□□□□□ -2.22
MSN5YDR335W RPL7BQ12213 244 aaKnown RBP1.17□□□□□ -2.22
MSN5YDR335W EAF3Q12432 401 aa1.17□□□□□ -2.22
MSN5YDR335W SWI1P09547 1314 aa1.17□□□□□ -2.22
MSN5YDR335W ADE1P27616 306 aa1.17□□□□□ -2.22
MSN5YDR335W PEX3P28795 441 aa1.17□□□□□ -2.22
MSN5YDR335W CAM1P29547 415 aaKnown RBP1.17□□□□□ -2.22
MSN5YDR335W ZIP1P31111 875 aa1.17□□□□□ -2.22
MSN5YDR335W NUP2P32499 720 aa1.17□□□□□ -2.22
MSN5YDR335W RIB5P38145 238 aa1.17□□□□□ -2.22
MSN5YDR335W HEK2P38199 381 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
MSN5YDR335W RCK1P38622 512 aa1.17□□□□□ -2.22
MSN5YDR335W PAC2P39937 518 aa1.17□□□□□ -2.22
MSN5YDR335W DDI1P40087 428 aa1.17□□□□□ -2.22
MSN5YDR335W YER186CP40101 306 aa1.17□□□□□ -2.22
MSN5YDR335W YIL029CP40538 142 aa1.17□□□□□ -2.22
MSN5YDR335W PSA1P41940 361 aaKnown RBP1.17□□□□□ -2.22
MSN5YDR335W CPR7P47103 393 aa1.17□□□□□ -2.22
MSN5YDR335W NUP57P48837 541 aa1.17□□□□□ -2.22
MSN5YDR335W BRR6P53062 197 aa1.17□□□□□ -2.22
MSN5YDR335W RIF2Q06208 395 aa1.17□□□□□ -2.22
MSN5YDR335W YOR289WQ12012 251 aaPredicted RBP1.17□□□□□ -2.22
MSN5YDR335W YHR214C-EQ8TGK0 99 aa1.17□□□□□ -2.22
MSN5YDR335W ATP6P00854 259 aa1.16□□□□□ -2.22
MSN5YDR335W RPL42AP0CX27 106 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W RPL42BP0CX28 106 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W SNC1P31109 117 aa1.16□□□□□ -2.22
MSN5YDR335W ACB1P31787 87 aa1.16□□□□□ -2.22
MSN5YDR335W TAF14P35189 244 aa1.16□□□□□ -2.22
MSN5YDR335W GPX2P38143 162 aa1.16□□□□□ -2.22
MSN5YDR335W ATG12P38316 186 aa1.16□□□□□ -2.22
MSN5YDR335W CYC2P38909 366 aa1.16□□□□□ -2.22
MSN5YDR335W POG1P40473 351 aa1.16□□□□□ -2.22
MSN5YDR335W LYS20P48570 428 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W PYK2P52489 506 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W YLR152CP54072 576 aa1.16□□□□□ -2.22
MSN5YDR335W YDR248CQ03786 193 aa1.16□□□□□ -2.22
MSN5YDR335W DPP1Q05521 289 aa1.16□□□□□ -2.22
MSN5YDR335W MRPL51Q06090 140 aaPredicted RBP1.16□□□□□ -2.22
MSN5YDR335W GAS2Q06135 555 aa1.16□□□□□ -2.22
MSN5YDR335W TIM18Q08749 192 aa1.16□□□□□ -2.22
MSN5YDR335W YOR114WQ12219 294 aa1.16□□□□□ -2.22
MSN5YDR335W HMS1Q12398 434 aa1.16□□□□□ -2.22
MSN5YDR335W YCR024C-BQ3E7Z8 88 aa1.16□□□□□ -2.22
MSN5YDR335W RPL31AP0C2H8 113 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W YAP1P19880 650 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W LSB5P25369 354 aa1.16□□□□□ -2.22
MSN5YDR335W YEF1P32622 495 aa1.16□□□□□ -2.22
MSN5YDR335W CDC13P32797 924 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W UBC6P33296 250 aaPredicted RBP1.16□□□□□ -2.22
MSN5YDR335W YBP1P38315 674 aa1.16□□□□□ -2.22
MSN5YDR335W YHR122WP38829 231 aa1.16□□□□□ -2.22
MSN5YDR335W YHR127WP38833 243 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W YPS6P40583 537 aa1.16□□□□□ -2.22
MSN5YDR335W LSM1P47017 172 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W AIM25P47140 327 aa1.16□□□□□ -2.22
MSN5YDR335W AVT4P50944 713 aa1.16□□□□□ -2.22
MSN5YDR335W YGL039WP53183 348 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W OKP1P53298 406 aa1.16□□□□□ -2.22
MSN5YDR335W MKC7P53379 596 aa1.16□□□□□ -2.22
MSN5YDR335W MSO1P53604 210 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W YPL077CQ02831 240 aa1.16□□□□□ -2.22
MSN5YDR335W ARO80Q04052 950 aa1.16□□□□□ -2.22
MSN5YDR335W GMC1Q04399 608 aa1.16□□□□□ -2.22
MSN5YDR335W YLR179CQ06252 201 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W RFU1Q08003 200 aa1.16□□□□□ -2.22
MSN5YDR335W RRG7Q08774 242 aaPredicted RBP1.16□□□□□ -2.22
MSN5YDR335W RFM1Q12192 310 aa1.16□□□□□ -2.22
MSN5YDR335W QCR7P00128 127 aa1.16□□□□□ -2.22
MSN5YDR335W STE7P06784 515 aa1.16□□□□□ -2.22
MSN5YDR335W MTF1P14908 341 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W SEN2P16658 377 aa1.16□□□□□ -2.22
MSN5YDR335W AIM17P23180 465 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W CNA1P23287 553 aa1.16□□□□□ -2.22
MSN5YDR335W DCC1P25559 380 aa1.16□□□□□ -2.22
MSN5YDR335W CDC50P25656 391 aa1.16□□□□□ -2.22
MSN5YDR335W HOM6P31116 359 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W YMC1P32331 307 aa1.16□□□□□ -2.22
MSN5YDR335W KTI12P34253 313 aaKnown RBP1.16□□□□□ -2.22
MSN5YDR335W MRPL39P36533 70 aa1.16□□□□□ -2.22
MSN5YDR335W FRM2P37261 193 aa1.16□□□□□ -2.22
MSN5YDR335W IST2P38250 946 aa1.16□□□□□ -2.22
MSN5YDR335W APD1P38281 316 aa1.16□□□□□ -2.22
MSN5YDR335W FRT2P39734 528 aa1.16□□□□□ -2.22
MSN5YDR335W HAT2P39984 401 aa1.16□□□□□ -2.22
MSN5YDR335W MIT1P40002 666 aa1.16□□□□□ -2.22
MSN5YDR335W KRE29P40026 464 aa1.16□□□□□ -2.22
MSN5YDR335W FAU1P40099 211 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 646 ms