RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W GCD1P09032 578 aaPredicted RBP11□□□□□ -0.65
PTP1YDL230W SCO1P23833 295 aa11□□□□□ -0.65
PTP1YDL230W CWH43P25618 953 aa11□□□□□ -0.65
PTP1YDL230W ACB1P31787 87 aa11□□□□□ -0.65
PTP1YDL230W GPI14P47088 403 aaKnown RBP11□□□□□ -0.65
PTP1YDL230W RMD9P53140 646 aaKnown RBP11□□□□□ -0.65
PTP1YDL230W ARG5,6Q01217 863 aa11□□□□□ -0.65
PTP1YDL230W YPR147CQ06522 304 aaKnown RBP11□□□□□ -0.65
PTP1YDL230W MIM1Q08176 113 aa11□□□□□ -0.65
PTP1YDL230W PAR32Q12515 295 aaKnown RBP11□□□□□ -0.65
PTP1YDL230W YOS9Q99220 542 aa11□□□□□ -0.65
PTP1YDL230W HOP09932 586 aa10.99□□□□□ -0.65
PTP1YDL230W SEN2P16658 377 aa10.99□□□□□ -0.65
PTP1YDL230W AIM17P23180 465 aaKnown RBP10.99□□□□□ -0.65
PTP1YDL230W MEK1P24719 497 aaPredicted RBP10.99□□□□□ -0.65
PTP1YDL230W KRR1P25586 316 aaPredicted RBP10.99□□□□□ -0.65
PTP1YDL230W WBP1P33767 430 aaKnown RBP10.99□□□□□ -0.65
PTP1YDL230W SMB1P40018 196 aaKnown RBP10.99□□□□□ -0.65
PTP1YDL230W ECM27P47144 725 aa10.99□□□□□ -0.65
PTP1YDL230W JAC1P53193 184 aa10.99□□□□□ -0.65
PTP1YDL230W YGR126WP53274 230 aa10.99□□□□□ -0.65
PTP1YDL230W DID2P69771 204 aa10.99□□□□□ -0.65
PTP1YDL230W APM1Q00776 475 aaPredicted RBP10.99□□□□□ -0.65
PTP1YDL230W CTF19Q02732 369 aa10.99□□□□□ -0.65
PTP1YDL230W FSH3Q99369 266 aa10.99□□□□□ -0.65
PTP1YDL230W TDH2P00358 332 aaKnown RBP10.98□□□□□ -0.65
PTP1YDL230W ARG80P07249 177 aa10.98□□□□□ -0.65
PTP1YDL230W MATALPHA1P0CY06 175 aa10.98□□□□□ -0.65
PTP1YDL230W HMLALPHA1P0CY07 175 aa10.98□□□□□ -0.65
PTP1YDL230W YCR016WP25617 290 aaKnown RBP10.98□□□□□ -0.65
PTP1YDL230W GEP4P38812 185 aa10.98□□□□□ -0.65
PTP1YDL230W SYS1P41544 203 aa10.98□□□□□ -0.65
PTP1YDL230W TYW3P53177 273 aa10.98□□□□□ -0.65
PTP1YDL230W YGR066CP53242 292 aa10.98□□□□□ -0.65
PTP1YDL230W MTM1P53320 366 aa10.98□□□□□ -0.65
PTP1YDL230W NNT1Q05874 261 aa10.98□□□□□ -0.65
PTP1YDL230W SYC1Q08553 188 aaPredicted RBP10.98□□□□□ -0.65
PTP1YDL230W SWM1Q12379 170 aa10.98□□□□□ -0.65
PTP1YDL230W COX1P00401 534 aa10.97□□□□□ -0.65
PTP1YDL230W CTA1P15202 515 aa10.97□□□□□ -0.65
PTP1YDL230W PET18P25362 215 aa10.97□□□□□ -0.65
PTP1YDL230W COS9P36034 407 aa10.97□□□□□ -0.65
PTP1YDL230W SSH1P38353 490 aaKnown RBP10.97□□□□□ -0.65
PTP1YDL230W NIT3P49954 291 aa10.97□□□□□ -0.65
PTP1YDL230W RSM27P53305 110 aa10.97□□□□□ -0.65
PTP1YDL230W PDR16P53860 351 aaKnown RBP10.97□□□□□ -0.65
PTP1YDL230W GIS1Q03833 894 aa10.97□□□□□ -0.65
PTP1YDL230W RDL2Q08742 149 aaKnown RBP10.97□□□□□ -0.65
PTP1YDL230W FMP27Q06179 2628 aa10.96□□□□□ -0.65
PTP1YDL230W AAC1P04710 309 aa10.96□□□□□ -0.65
PTP1YDL230W DSF1P0CX08 502 aa10.96□□□□□ -0.65
PTP1YDL230W YNR073CP0CX09 502 aa10.96□□□□□ -0.65
PTP1YDL230W CDC26P14724 124 aa10.96□□□□□ -0.65
PTP1YDL230W MRP17P28778 131 aa10.96□□□□□ -0.65
PTP1YDL230W EHD3P28817 500 aa10.96□□□□□ -0.65
PTP1YDL230W ALG3P38179 458 aa10.96□□□□□ -0.65
PTP1YDL230W DLS1P40366 167 aa10.96□□□□□ -0.65
PTP1YDL230W BUD8P41698 603 aa10.96□□□□□ -0.65
PTP1YDL230W CUP9P41817 306 aa10.96□□□□□ -0.65
PTP1YDL230W NIT2P47016 307 aa10.96□□□□□ -0.65
PTP1YDL230W ECL1P48235 211 aa10.96□□□□□ -0.65
PTP1YDL230W YDR249CQ03787 373 aa10.96□□□□□ -0.65
PTP1YDL230W CTS2Q06350 511 aa10.96□□□□□ -0.65
PTP1YDL230W YAL064W-BO13512 126 aa10.95□□□□□ -0.66
PTP1YDL230W URA3P03962 267 aa10.95□□□□□ -0.66
PTP1YDL230W HXT2P23585 541 aa10.95□□□□□ -0.66
PTP1YDL230W PCL1P24867 279 aa10.95□□□□□ -0.66
PTP1YDL230W SNC2P33328 115 aa10.95□□□□□ -0.66
PTP1YDL230W YER010CP40011 234 aa10.95□□□□□ -0.66
PTP1YDL230W AVT7P40501 490 aa10.95□□□□□ -0.66
PTP1YDL230W DUG1P43616 481 aaKnown RBP10.95□□□□□ -0.66
PTP1YDL230W CIN2P46670 268 aa10.95□□□□□ -0.66
PTP1YDL230W BXI1P48558 297 aa10.95□□□□□ -0.66
PTP1YDL230W POP6P53218 158 aa10.95□□□□□ -0.66
PTP1YDL230W SCW4P53334 386 aaKnown RBP10.95□□□□□ -0.66
PTP1YDL230W PRM15Q03262 622 aa10.95□□□□□ -0.66
PTP1YDL230W YDR102CQ03864 110 aa10.95□□□□□ -0.66
PTP1YDL230W RVB1Q03940 463 aaKnown RBP10.95□□□□□ -0.66
PTP1YDL230W YOR385WQ08909 290 aa10.95□□□□□ -0.66
PTP1YDL230W NOP56Q12460 504 aaKnown RBP RIP-Chip data10.95□□□□□ -0.66not detected
PTP1YDL230W GLT1Q12680 2145 aaKnown RBP10.94□□□□□ -0.66
PTP1YDL230W PHO2P07269 559 aa10.94□□□□□ -0.66
PTP1YDL230W CHO1P08456 276 aa10.94□□□□□ -0.66
PTP1YDL230W HOM3P10869 527 aa10.94□□□□□ -0.66
PTP1YDL230W ADH7P25377 361 aa10.94□□□□□ -0.66
PTP1YDL230W NAB2P32505 525 aaKnown RBP RIP-Chip data10.94□□□□□ -0.66not detected
PTP1YDL230W SAM50P53969 484 aa10.94□□□□□ -0.66
PTP1YDL230W ATG21Q02887 496 aa10.94□□□□□ -0.66
PTP1YDL230W YRM1Q12340 786 aa10.94□□□□□ -0.66
PTP1YDL230W HAA1Q12753 694 aaKnown RBP10.94□□□□□ -0.66
PTP1YDL230W HFA1P32874 2273 aa10.93□□□□□ -0.66
PTP1YDL230W MSW1P04803 379 aa10.93□□□□□ -0.66
PTP1YDL230W RPL17AP05740 184 aaKnown RBP10.93□□□□□ -0.66
PTP1YDL230W MCM10P32354 571 aa10.93□□□□□ -0.66
PTP1YDL230W APD1P38281 316 aa10.93□□□□□ -0.66
PTP1YDL230W OM14P38325 134 aa10.93□□□□□ -0.66
PTP1YDL230W GRE3P38715 327 aaKnown RBP RIP-Chip data10.93□□□□□ -0.66not detected
PTP1YDL230W QDR1P40475 563 aa10.93□□□□□ -0.66
PTP1YDL230W RPL17BP46990 184 aaKnown RBP10.93□□□□□ -0.66
PTP1YDL230W PGU1P47180 361 aa10.93□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms