RNA–Protein interactions for RNA: YBR279W

PAF1, Transcript of Component of the Paf1p complex involved in transcription elongation, yeastyeast

Gene PAF1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAF1YBR279W PEX31P53203 462 aa3.29□□□□□ -1.88
PAF1YBR279W ALG9P53868 555 aaKnown RBP3.29□□□□□ -1.88
PAF1YBR279W VBA1Q04301 562 aa3.29□□□□□ -1.88
PAF1YBR279W TIM22Q12328 207 aa3.29□□□□□ -1.88
PAF1YBR279W NUP157P40064 1391 aaKnown RBP3.28□□□□□ -1.88
PAF1YBR279W TDH1P00360 332 aaKnown RBP3.28□□□□□ -1.88
PAF1YBR279W RPS3P05750 240 aaKnown RBP3.28□□□□□ -1.88
PAF1YBR279W OM45P16547 393 aa3.28□□□□□ -1.88
PAF1YBR279W CAB3P36076 571 aa3.28□□□□□ -1.88
PAF1YBR279W RTT105P40063 208 aa3.28□□□□□ -1.88
PAF1YBR279W FMP33P46998 180 aa3.28□□□□□ -1.88
PAF1YBR279W TAD2P47058 250 aa3.28□□□□□ -1.88
PAF1YBR279W GPI8P49018 411 aa3.28□□□□□ -1.88
PAF1YBR279W YOS9Q99220 542 aa3.28□□□□□ -1.88
PAF1YBR279W SSK22P25390 1331 aaPredicted RBP3.28□□□□□ -1.88
PAF1YBR279W MIG1P27705 504 aa3.27□□□□□ -1.89
PAF1YBR279W YKR032WP36127 104 aa3.27□□□□□ -1.89
PAF1YBR279W SPL2P38839 148 aa3.27□□□□□ -1.89
PAF1YBR279W ATG5Q12380 294 aa3.27□□□□□ -1.89
PAF1YBR279W ZWF1P11412 505 aaKnown RBP3.26□□□□□ -1.89
PAF1YBR279W MET16P18408 261 aaPredicted RBP3.26□□□□□ -1.89
PAF1YBR279W RRT12P25381 491 aa3.26□□□□□ -1.89
PAF1YBR279W PPQ1P32945 549 aa3.26□□□□□ -1.89
PAF1YBR279W YBL081WP38180 368 aaKnown RBP3.26□□□□□ -1.89
PAF1YBR279W HSM3P38348 480 aa3.26□□□□□ -1.89
PAF1YBR279W KAP114P53067 1004 aa3.26□□□□□ -1.89
PAF1YBR279W HRT1Q08273 121 aa3.26□□□□□ -1.89
PAF1YBR279W ISD11Q6Q560 94 aa3.26□□□□□ -1.89
PAF1YBR279W ATG15P25641 520 aa3.25□□□□□ -1.89
PAF1YBR279W BMH1P29311 267 aaKnown RBP3.25□□□□□ -1.89
PAF1YBR279W SUR2P38992 349 aa3.25□□□□□ -1.89
PAF1YBR279W RCY1P39531 840 aa3.25□□□□□ -1.89
PAF1YBR279W LSB1P53281 241 aa3.25□□□□□ -1.89
PAF1YBR279W CTR3Q06686 241 aa3.25□□□□□ -1.89
PAF1YBR279W MRPL37P36532 105 aa3.24□□□□□ -1.89
PAF1YBR279W SDH4P37298 181 aa3.24□□□□□ -1.89
PAF1YBR279W HIS1P00498 297 aaKnown RBP3.23□□□□□ -1.89
PAF1YBR279W RPL4AP10664 362 aaKnown RBP3.23□□□□□ -1.89
PAF1YBR279W UTR5P32630 166 aa3.23□□□□□ -1.89
PAF1YBR279W SPT8P38915 602 aa3.23□□□□□ -1.89
PAF1YBR279W NPT1P39683 429 aaKnown RBP3.23□□□□□ -1.89
PAF1YBR279W RPL4BP49626 362 aaKnown RBP3.23□□□□□ -1.89
PAF1YBR279W SLX9P53251 210 aaPredicted RBP3.23□□□□□ -1.89
PAF1YBR279W SDC1Q03323 175 aa3.23□□□□□ -1.89
PAF1YBR279W FEX1Q08913 375 aa3.23□□□□□ -1.89
PAF1YBR279W FEX2Q08991 375 aa3.23□□□□□ -1.89
PAF1YBR279W POF1P25576 258 aa3.22□□□□□ -1.89
PAF1YBR279W SYF2P53277 215 aaPredicted RBP3.22□□□□□ -1.89
PAF1YBR279W MPP6P53725 186 aaPredicted RBP3.22□□□□□ -1.89
PAF1YBR279W FMP41P53889 259 aaKnown RBP3.22□□□□□ -1.89
PAF1YBR279W TDH2P00358 332 aaKnown RBP3.21□□□□□ -1.89
PAF1YBR279W MRP1P10662 321 aaKnown RBP3.21□□□□□ -1.89
PAF1YBR279W KRE1P17260 313 aa3.21□□□□□ -1.89
PAF1YBR279W CSG2P35206 410 aa3.21□□□□□ -1.89
PAF1YBR279W DDI1P40087 428 aa3.21□□□□□ -1.89
PAF1YBR279W MNT4P53745 580 aa3.21□□□□□ -1.89
PAF1YBR279W SME1Q12330 94 aaPredicted RBP3.21□□□□□ -1.89
PAF1YBR279W HIS3P06633 220 aa3.2□□□□□ -1.9
PAF1YBR279W HMT1P38074 348 aa3.2□□□□□ -1.9
PAF1YBR279W SCC4P40090 624 aa3.2□□□□□ -1.9
PAF1YBR279W OST3P48439 350 aa3.2□□□□□ -1.9
PAF1YBR279W YNL095CP53932 642 aa3.2□□□□□ -1.9
PAF1YBR279W PAN1P32521 1480 aa3.2□□□□□ -1.9
PAF1YBR279W ATG12P38316 186 aa3.19□□□□□ -1.9
PAF1YBR279W COA1P40452 197 aa3.19□□□□□ -1.9
PAF1YBR279W SER33P40510 469 aa3.19□□□□□ -1.9
PAF1YBR279W YJR141WP47172 347 aaPredicted RBP3.19□□□□□ -1.9
PAF1YBR279W CLP1Q08685 445 aaPredicted RBP3.19□□□□□ -1.9
PAF1YBR279W AI5_BETAQ9ZZX0 354 aa3.19□□□□□ -1.9
PAF1YBR279W STH1P32597 1359 aa3.19□□□□□ -1.9
PAF1YBR279W RIB7P33312 244 aa3.19□□□□□ -1.9
PAF1YBR279W ARN2P38724 620 aa3.19□□□□□ -1.9
PAF1YBR279W YJR012CP47087 207 aa3.19□□□□□ -1.9
PAF1YBR279W NIF3P53081 288 aa3.19□□□□□ -1.9
PAF1YBR279W ALG11P53954 548 aaKnown RBP3.19□□□□□ -1.9
PAF1YBR279W PEX10Q05568 337 aa3.19□□□□□ -1.9
PAF1YBR279W ARV1Q06541 321 aa3.19□□□□□ -1.9
PAF1YBR279W SMT3Q12306 101 aaKnown RBP3.19□□□□□ -1.9
PAF1YBR279W YER084WP40057 128 aa3.18□□□□□ -1.9
PAF1YBR279W YPL039WQ03080 316 aa3.18□□□□□ -1.9
PAF1YBR279W ATC1Q04005 294 aa3.18□□□□□ -1.9
PAF1YBR279W ADH6Q04894 360 aaKnown RBP3.18□□□□□ -1.9
PAF1YBR279W YOL019WQ08157 551 aa3.18□□□□□ -1.9
PAF1YBR279W DAL82P21705 255 aa3.17□□□□□ -1.9
PAF1YBR279W SFC1P33303 322 aa3.17□□□□□ -1.9
PAF1YBR279W HEK2P38199 381 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
PAF1YBR279W TEM1P38987 245 aa3.17□□□□□ -1.9
PAF1YBR279W PRM9P39551 298 aa3.17□□□□□ -1.9
PAF1YBR279W MEP1P40260 492 aa3.17□□□□□ -1.9
PAF1YBR279W RPL10P41805 221 aaKnown RBP3.17□□□□□ -1.9
PAF1YBR279W NBP35P52920 328 aa3.17□□□□□ -1.9
PAF1YBR279W LOA1Q06508 300 aa3.17□□□□□ -1.9
PAF1YBR279W CDD1Q06549 142 aa3.17□□□□□ -1.9
PAF1YBR279W RPP0P05317 312 aaKnown RBP3.16□□□□□ -1.9
PAF1YBR279W RAD3P06839 778 aa3.16□□□□□ -1.9
PAF1YBR279W AAH1P53909 347 aa3.16□□□□□ -1.9
PAF1YBR279W SWS2P53937 143 aa3.16□□□□□ -1.9
PAF1YBR279W OST6Q03723 332 aa3.16□□□□□ -1.9
PAF1YBR279W COX2P00410 251 aa3.15□□□□□ -1.91
PAF1YBR279W VPS3P23643 1011 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms