RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C TPC1P53257 314 aa2.41□□□□□ -2.02
SHG1YBR258C INP2Q03824 705 aa2.41□□□□□ -2.02
SHG1YBR258C API2Q04413 109 aa2.41□□□□□ -2.02
SHG1YBR258C YDL144CQ07589 356 aa2.41□□□□□ -2.02
SHG1YBR258C RDL2Q08742 149 aaKnown RBP2.41□□□□□ -2.02
SHG1YBR258C RTC5Q12108 567 aaKnown RBP2.41□□□□□ -2.02
SHG1YBR258C TIR4Q12218 487 aaPredicted RBP2.41□□□□□ -2.02
SHG1YBR258C YPS1P32329 569 aa2.4□□□□□ -2.03
SHG1YBR258C KRE6P32486 720 aa2.4□□□□□ -2.03
SHG1YBR258C RAD23P32628 398 aaKnown RBP2.4□□□□□ -2.03
SHG1YBR258C CBF5P33322 483 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
SHG1YBR258C YKL187CP34231 750 aa2.4□□□□□ -2.03
SHG1YBR258C SMF2P38778 549 aa2.4□□□□□ -2.03
SHG1YBR258C RRT13P40042 185 aa2.4□□□□□ -2.03
SHG1YBR258C RRG9P40156 214 aa2.4□□□□□ -2.03
SHG1YBR258C AIM20P40451 204 aa2.4□□□□□ -2.03
SHG1YBR258C OKP1P53298 406 aa2.4□□□□□ -2.03
SHG1YBR258C PGA2P53903 129 aa2.4□□□□□ -2.03
SHG1YBR258C MRX9Q07349 420 aaKnown RBP2.4□□□□□ -2.03
SHG1YBR258C YAL067W-AQ8TGK6 75 aa2.4□□□□□ -2.03
SHG1YBR258C CYR1P08678 2026 aaKnown RBP2.4□□□□□ -2.03
SHG1YBR258C STE2D6VTK4 431 aa2.39□□□□□ -2.03
SHG1YBR258C VPS63O13549 108 aa2.39□□□□□ -2.03
SHG1YBR258C RPL18AP0CX49 186 aaKnown RBP2.39□□□□□ -2.03
SHG1YBR258C RPL18BP0CX50 186 aaKnown RBP2.39□□□□□ -2.03
SHG1YBR258C GCD2P12754 651 aaPredicted RBP2.39□□□□□ -2.03
SHG1YBR258C CTA1P15202 515 aa2.39□□□□□ -2.03
SHG1YBR258C YKL162CP36052 402 aa2.39□□□□□ -2.03
SHG1YBR258C FRM2P37261 193 aa2.39□□□□□ -2.03
SHG1YBR258C ECM13P38195 257 aa2.39□□□□□ -2.03
SHG1YBR258C POP2P39008 433 aa2.39□□□□□ -2.03
SHG1YBR258C UTP25P40498 721 aaKnown RBP2.39□□□□□ -2.03
SHG1YBR258C HCH1P53834 153 aa2.39□□□□□ -2.03
SHG1YBR258C EGD1Q02642 157 aaKnown RBP2.39□□□□□ -2.03
SHG1YBR258C CAB5Q03941 241 aa2.39□□□□□ -2.03
SHG1YBR258C APC4Q04601 652 aa2.39□□□□□ -2.03
SHG1YBR258C BUR2Q05949 395 aa2.39□□□□□ -2.03
SHG1YBR258C DTD1Q07648 150 aaKnown RBP2.39□□□□□ -2.03
SHG1YBR258C BPH1P25356 2167 aa2.39□□□□□ -2.03
SHG1YBR258C BCY1P07278 416 aaKnown RBP2.38□□□□□ -2.03
SHG1YBR258C OM45P16547 393 aa2.38□□□□□ -2.03
SHG1YBR258C ITR2P30606 609 aa2.38□□□□□ -2.03
SHG1YBR258C SWC5P38326 303 aa2.38□□□□□ -2.03
SHG1YBR258C LOH1P47055 219 aa2.38□□□□□ -2.03
SHG1YBR258C SDS23P53172 527 aa2.38□□□□□ -2.03
SHG1YBR258C YGR168CP53293 376 aa2.38□□□□□ -2.03
SHG1YBR258C YLR297WQ05899 129 aa2.38□□□□□ -2.03
SHG1YBR258C YOR342CQ12182 319 aa2.38□□□□□ -2.03
SHG1YBR258C APC2Q12440 853 aa2.38□□□□□ -2.03
SHG1YBR258C CKA2P19454 339 aa2.37□□□□□ -2.03
SHG1YBR258C MEI5P32489 222 aa2.37□□□□□ -2.03
SHG1YBR258C KTI12P34253 313 aaKnown RBP2.37□□□□□ -2.03
SHG1YBR258C YHR035WP38769 630 aa2.37□□□□□ -2.03
SHG1YBR258C TRM9P49957 279 aa2.37□□□□□ -2.03
SHG1YBR258C RIB4P50861 169 aaPredicted RBP2.37□□□□□ -2.03
SHG1YBR258C DBP6P53734 629 aaKnown RBP2.37□□□□□ -2.03
SHG1YBR258C PIR1Q03178 341 aa2.37□□□□□ -2.03
SHG1YBR258C CUR1Q06469 252 aa2.37□□□□□ -2.03
SHG1YBR258C PAA1Q12447 191 aaKnown RBP2.37□□□□□ -2.03
SHG1YBR258C DFM1Q12743 341 aaKnown RBP2.37□□□□□ -2.03
SHG1YBR258C SPS100P13130 326 aa2.36□□□□□ -2.03
SHG1YBR258C TPS2P31688 896 aaKnown RBP2.36□□□□□ -2.03
SHG1YBR258C UBC6P33296 250 aaPredicted RBP2.36□□□□□ -2.03
SHG1YBR258C MNN9P39107 395 aaKnown RBP2.36□□□□□ -2.03
SHG1YBR258C SOP4P39543 234 aaPredicted RBP2.36□□□□□ -2.03
SHG1YBR258C MIC19P43594 170 aa2.36□□□□□ -2.03
SHG1YBR258C ABZ2Q03266 374 aa2.36□□□□□ -2.03
SHG1YBR258C SPG3Q04398 127 aaPredicted RBP2.36□□□□□ -2.03
SHG1YBR258C RRG8Q06109 277 aa2.36□□□□□ -2.03
SHG1YBR258C MIM1Q08176 113 aa2.36□□□□□ -2.03
SHG1YBR258C YOL029CQ08187 201 aa2.36□□□□□ -2.03
SHG1YBR258C YLR046CQ12253 270 aa2.36□□□□□ -2.03
SHG1YBR258C STF1P01098 86 aa2.35□□□□□ -2.03
SHG1YBR258C SCL1P21243 252 aaKnown RBP2.35□□□□□ -2.03
SHG1YBR258C COX10P21592 462 aa2.35□□□□□ -2.03
SHG1YBR258C DAL81P21657 970 aa2.35□□□□□ -2.03
SHG1YBR258C RPL5P26321 297 aaKnown RBP2.35□□□□□ -2.03
SHG1YBR258C VPH2P32341 215 aa2.35□□□□□ -2.03
SHG1YBR258C KDX1P36005 433 aa2.35□□□□□ -2.03
SHG1YBR258C RFT1P38206 574 aaPredicted RBP2.35□□□□□ -2.03
SHG1YBR258C RRF1P38771 230 aa2.35□□□□□ -2.03
SHG1YBR258C CTM1P38818 585 aa2.35□□□□□ -2.03
SHG1YBR258C FET3P38993 636 aa2.35□□□□□ -2.03
SHG1YBR258C END3P39013 349 aa2.35□□□□□ -2.03
SHG1YBR258C FRT2P39734 528 aa2.35□□□□□ -2.03
SHG1YBR258C YER184CP39961 794 aa2.35□□□□□ -2.03
SHG1YBR258C RSM25P40496 264 aa2.35□□□□□ -2.03
SHG1YBR258C PRP24P49960 444 aaKnown RBP2.35□□□□□ -2.03
SHG1YBR258C BIO4P53630 237 aa2.35□□□□□ -2.03
SHG1YBR258C ZRG17P53735 605 aa2.35□□□□□ -2.03
SHG1YBR258C RNY1Q02933 434 aaKnown RBP2.35□□□□□ -2.03
SHG1YBR258C VTI1Q04338 217 aa2.35□□□□□ -2.03
SHG1YBR258C GMC1Q04399 608 aa2.35□□□□□ -2.03
SHG1YBR258C VAC14Q06708 880 aa2.35□□□□□ -2.03
SHG1YBR258C SLF1Q12034 447 aaKnown RBP2.35□□□□□ -2.03
SHG1YBR258C YPL245WQ12179 454 aaKnown RBP2.35□□□□□ -2.03
SHG1YBR258C MDY2Q12285 212 aa2.35□□□□□ -2.03
SHG1YBR258C FAS1P07149 2051 aaKnown RBP2.35□□□□□ -2.03
SHG1YBR258C FUS3P16892 353 aaKnown RBP2.34□□□□□ -2.03
SHG1YBR258C YCR102CP25608 368 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 112.5 ms