RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C YJR012CP47087 207 aa5.06□□□□□ -1.6
PDB1YBR221C ALG13P53178 202 aa5.06□□□□□ -1.6
PDB1YBR221C YIF1P53845 314 aaKnown RBP5.06□□□□□ -1.6
PDB1YBR221C YNL095CP53932 642 aa5.06□□□□□ -1.6
PDB1YBR221C YNL092WP53934 400 aa5.06□□□□□ -1.6
PDB1YBR221C AIM34Q03673 198 aa5.06□□□□□ -1.6
PDB1YBR221C GRX8Q05926 109 aa5.06□□□□□ -1.6
PDB1YBR221C CTR3Q06686 241 aa5.06□□□□□ -1.6
PDB1YBR221C HEM25Q07534 307 aa5.06□□□□□ -1.6
PDB1YBR221C RKI1Q12189 258 aa5.06□□□□□ -1.6
PDB1YBR221C YCT1Q12235 531 aa5.06□□□□□ -1.6
PDB1YBR221C RDI1Q12434 202 aa5.06□□□□□ -1.6
PDB1YBR221C FUN19P28003 413 aaPredicted RBP5.05□□□□□ -1.6
PDB1YBR221C MUD1P32605 298 aaKnown RBP5.05□□□□□ -1.6
PDB1YBR221C PEX2P32800 271 aa5.05□□□□□ -1.6
PDB1YBR221C ECM15P35195 104 aa5.05□□□□□ -1.6
PDB1YBR221C ELF1P36053 145 aa5.05□□□□□ -1.6
PDB1YBR221C IST2P38250 946 aa5.05□□□□□ -1.6
PDB1YBR221C SYG1P40528 902 aa5.05□□□□□ -1.6
PDB1YBR221C SNU56Q03782 492 aaKnown RBP5.05□□□□□ -1.6
PDB1YBR221C CSN9Q03981 162 aa5.05□□□□□ -1.6
PDB1YBR221C YMR315WQ04869 349 aaKnown RBP5.05□□□□□ -1.6
PDB1YBR221C HRD3Q05787 833 aa5.05□□□□□ -1.6
PDB1YBR221C NEJ1Q06148 342 aa5.05□□□□□ -1.6
PDB1YBR221C FRQ1Q06389 190 aa5.05□□□□□ -1.6
PDB1YBR221C NOC4Q06512 552 aaPredicted RBP5.05□□□□□ -1.6
PDB1YBR221C SSK1Q07084 712 aa5.05□□□□□ -1.6
PDB1YBR221C YDL086WQ07505 273 aa5.05□□□□□ -1.6
PDB1YBR221C USB1Q12208 290 aaKnown RBP5.05□□□□□ -1.6
PDB1YBR221C SNU23Q12368 194 aaPredicted RBP5.05□□□□□ -1.6
PDB1YBR221C ICT1Q12385 394 aa5.05□□□□□ -1.6
PDB1YBR221C IZH4Q99393 312 aa5.05□□□□□ -1.6
PDB1YBR221C CCH1P50077 2039 aa5.05□□□□□ -1.6
PDB1YBR221C ACC1Q00955 2233 aaKnown RBP5.04□□□□□ -1.6
PDB1YBR221C MSB2P32334 1306 aa5.04□□□□□ -1.6
PDB1YBR221C MES1P00958 751 aaKnown RBP5.04□□□□□ -1.6
PDB1YBR221C HAP2P06774 265 aa5.04□□□□□ -1.6
PDB1YBR221C RPL20AP0CX23 172 aaKnown RBP5.04□□□□□ -1.6
PDB1YBR221C RPL20BP0CX24 172 aaPredicted RBP5.04□□□□□ -1.6
PDB1YBR221C CUP2P15315 225 aa5.04□□□□□ -1.6
PDB1YBR221C GLN3P18494 730 aa5.04□□□□□ -1.6
PDB1YBR221C BUD23P25627 275 aaPredicted RBP5.04□□□□□ -1.6
PDB1YBR221C HOM6P31116 359 aaKnown RBP5.04□□□□□ -1.6
PDB1YBR221C APE2P32454 952 aaKnown RBP5.04□□□□□ -1.6
PDB1YBR221C COX13P32799 129 aa5.04□□□□□ -1.6
PDB1YBR221C MRPL17P36528 281 aa5.04□□□□□ -1.6
PDB1YBR221C HEK2P38199 381 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
PDB1YBR221C YHR035WP38769 630 aa5.04□□□□□ -1.6
PDB1YBR221C MET30P39014 640 aa5.04□□□□□ -1.6
PDB1YBR221C RBG1P39729 369 aa5.04□□□□□ -1.6
PDB1YBR221C UBP5P39944 805 aa5.04□□□□□ -1.6
PDB1YBR221C SMB1P40018 196 aaKnown RBP5.04□□□□□ -1.6
PDB1YBR221C RGI1P40043 161 aaPredicted RBP5.04□□□□□ -1.6
PDB1YBR221C FIS1P40515 155 aa5.04□□□□□ -1.6
PDB1YBR221C YIA6P40556 373 aa5.04□□□□□ -1.6
PDB1YBR221C MSO1P53604 210 aaKnown RBP5.04□□□□□ -1.6
PDB1YBR221C CAF40P53829 373 aa5.04□□□□□ -1.6
PDB1YBR221C DUG3P53871 357 aa5.04□□□□□ -1.6
PDB1YBR221C AAT1Q01802 451 aa5.04□□□□□ -1.6
PDB1YBR221C ARL3Q02804 198 aa5.04□□□□□ -1.6
PDB1YBR221C MAK3Q03503 176 aa5.04□□□□□ -1.6
PDB1YBR221C YDR387CQ04162 555 aa5.04□□□□□ -1.6
PDB1YBR221C MRX9Q07349 420 aaKnown RBP5.04□□□□□ -1.6
PDB1YBR221C SGT1Q08446 395 aa5.04□□□□□ -1.6
PDB1YBR221C RGT2Q12300 763 aa5.04□□□□□ -1.6
PDB1YBR221C EFG1Q3E705 233 aaKnown RBP5.04□□□□□ -1.6
PDB1YBR221C CDC28P00546 298 aaKnown RBP5.03□□□□□ -1.6
PDB1YBR221C AI3P03877 415 aa5.03□□□□□ -1.6
PDB1YBR221C HEM2P05373 342 aa5.03□□□□□ -1.6
PDB1YBR221C HIS3P06633 220 aa5.03□□□□□ -1.6
PDB1YBR221C POF1P25576 258 aa5.03□□□□□ -1.6
PDB1YBR221C PEX34P25584 144 aa5.03□□□□□ -1.6
PDB1YBR221C PMT2P31382 759 aa5.03□□□□□ -1.6
PDB1YBR221C GSP1P32835 219 aaKnown RBP5.03□□□□□ -1.6
PDB1YBR221C GSP2P32836 220 aaKnown RBP5.03□□□□□ -1.6
PDB1YBR221C RAD5P32849 1169 aaPredicted RBP5.03□□□□□ -1.6
PDB1YBR221C NTF2P33331 125 aaKnown RBP5.03□□□□□ -1.6
PDB1YBR221C EFM1P38732 585 aa5.03□□□□□ -1.6
PDB1YBR221C FAA2P39518 744 aa5.03□□□□□ -1.6
PDB1YBR221C VPS52P39904 641 aa5.03□□□□□ -1.6
PDB1YBR221C CHA4P43634 648 aa5.03□□□□□ -1.6
PDB1YBR221C UBC11P52492 156 aa5.03□□□□□ -1.6
PDB1YBR221C RIM8P53179 542 aa5.03□□□□□ -1.6
PDB1YBR221C PEX31P53203 462 aa5.03□□□□□ -1.6
PDB1YBR221C LST7P53237 242 aa5.03□□□□□ -1.6
PDB1YBR221C CUZ1P53899 274 aa5.03□□□□□ -1.6
PDB1YBR221C ASI3P53983 676 aa5.03□□□□□ -1.6
PDB1YBR221C YLR152CP54072 576 aa5.03□□□□□ -1.6
PDB1YBR221C SLU7Q02775 382 aaKnown RBP5.03□□□□□ -1.6
PDB1YBR221C GLO2Q05584 274 aa5.03□□□□□ -1.6
PDB1YBR221C ECI1Q05871 280 aa5.03□□□□□ -1.6
PDB1YBR221C NKP2Q06162 153 aa5.03□□□□□ -1.6
PDB1YBR221C YPR091CQ06833 770 aa5.03□□□□□ -1.6
PDB1YBR221C YOR283WQ12040 230 aaKnown RBP5.03□□□□□ -1.6
PDB1YBR221C FYV7Q12247 151 aa5.03□□□□□ -1.6
PDB1YBR221C TY1A-NL1Q12391 440 aaKnown RBP5.03□□□□□ -1.6
PDB1YBR221C IRA1P18963 3092 aa5.02□□□□□ -1.61
PDB1YBR221C TPI1P00942 248 aaKnown RBP5.02□□□□□ -1.61
PDB1YBR221C RPL31AP0C2H8 113 aaKnown RBP5.02□□□□□ -1.61
PDB1YBR221C MTF1P14908 341 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms