RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 STP22P25604 385 aa7.83□□□□□ -1.16
LSR1LSR1 SUA5P32579 426 aa7.83□□□□□ -1.16
LSR1LSR1 ELO1P39540 310 aa7.83□□□□□ -1.16
LSR1LSR1 YNL208WP40159 199 aaKnown RBP7.83□□□□□ -1.16
LSR1LSR1 NAS2P40555 220 aa7.83□□□□□ -1.16
LSR1LSR1 CIS3P47001 227 aa7.83□□□□□ -1.16
LSR1LSR1 SWS2P53937 143 aa7.83□□□□□ -1.16
LSR1LSR1 MRPL1Q04599 285 aa7.83□□□□□ -1.16
LSR1LSR1 MRPL51Q06090 140 aaPredicted RBP7.83□□□□□ -1.16
LSR1LSR1 GRC3Q07845 632 aa7.83□□□□□ -1.16
LSR1LSR1 YDR262WQ12331 272 aa7.83□□□□□ -1.16
LSR1LSR1 ORT1Q12375 292 aa7.83□□□□□ -1.16
LSR1LSR1 FUR4P05316 633 aaKnown RBP7.82□□□□□ -1.16
LSR1LSR1 PHO2P07269 559 aa7.82□□□□□ -1.16
LSR1LSR1 SEC22P22214 214 aa7.82□□□□□ -1.16
LSR1LSR1 MXR2P25566 168 aa7.82□□□□□ -1.16
LSR1LSR1 MSN4P33749 630 aa7.82□□□□□ -1.16
LSR1LSR1 MKS1P34072 584 aa7.82□□□□□ -1.16
LSR1LSR1 GPX1P36014 167 aa7.82□□□□□ -1.16
LSR1LSR1 LAG1P38703 411 aa7.82□□□□□ -1.16
LSR1LSR1 ARO9P38840 513 aaPredicted RBP7.82□□□□□ -1.16
LSR1LSR1 IKI1P38874 309 aa7.82□□□□□ -1.16
LSR1LSR1 YIP4P53093 235 aa7.82□□□□□ -1.16
LSR1LSR1 OGG1P53397 376 aaPredicted RBP7.82□□□□□ -1.16
LSR1LSR1 MPA43P53583 542 aaPredicted RBP7.82□□□□□ -1.16
LSR1LSR1 GIC2Q06648 383 aa7.82□□□□□ -1.16
LSR1LSR1 YFT2Q06676 274 aa7.82□□□□□ -1.16
LSR1LSR1 HEM25Q07534 307 aa7.82□□□□□ -1.16
LSR1LSR1 COQ10Q08058 207 aa7.82□□□□□ -1.16
LSR1LSR1 YDR034W-BQ6Q5X2 51 aa7.82□□□□□ -1.16
LSR1LSR1 TDH2P00358 332 aaKnown RBP7.81□□□□□ -1.16
LSR1LSR1 PET494P07390 489 aaPredicted RBP7.81□□□□□ -1.16
LSR1LSR1 CDC34P14682 295 aa7.81□□□□□ -1.16
LSR1LSR1 RPB8P20436 146 aa7.81□□□□□ -1.16
LSR1LSR1 NUP1P20676 1076 aa7.81□□□□□ -1.16
LSR1LSR1 STE50P25344 346 aa7.81□□□□□ -1.16
LSR1LSR1 CWH43P25618 953 aa7.81□□□□□ -1.16
LSR1LSR1 SRX1P36077 127 aa7.81□□□□□ -1.16
LSR1LSR1 MRPL27P36526 146 aaPredicted RBP7.81□□□□□ -1.16
LSR1LSR1 ALG3P38179 458 aa7.81□□□□□ -1.16
LSR1LSR1 SDH8P38345 138 aa7.81□□□□□ -1.16
LSR1LSR1 GCV3P39726 170 aaPredicted RBP7.81□□□□□ -1.16
LSR1LSR1 YIL152WP40455 235 aa7.81□□□□□ -1.16
LSR1LSR1 SYS1P41544 203 aa7.81□□□□□ -1.16
LSR1LSR1 MOG1P47123 218 aa7.81□□□□□ -1.16
LSR1LSR1 RTK1Q12100 620 aaPredicted RBP7.81□□□□□ -1.16
LSR1LSR1 OPI3P05375 206 aa7.8□□□□□ -1.16
LSR1LSR1 SSA3P09435 649 aaKnown RBP7.8□□□□□ -1.16
LSR1LSR1 MATALPHA1P0CY06 175 aa7.8□□□□□ -1.16
LSR1LSR1 HMLALPHA1P0CY07 175 aa7.8□□□□□ -1.16
LSR1LSR1 DBF20P32328 564 aa7.8□□□□□ -1.16
LSR1LSR1 RPS27AP35997 82 aaKnown RBP7.8□□□□□ -1.16
LSR1LSR1 RPS27BP38711 82 aa7.8□□□□□ -1.16
LSR1LSR1 BFR1P38934 470 aaKnown RBP RIP-Chip data7.8□□□□□ -1.16not detected
LSR1LSR1 PGD1P40356 397 aa7.8□□□□□ -1.16
LSR1LSR1 CAF16P43569 289 aa7.8□□□□□ -1.16
LSR1LSR1 LSM8P47093 109 aaKnown RBP7.8□□□□□ -1.16
LSR1LSR1 ARG5,6Q01217 863 aa7.8□□□□□ -1.16
LSR1LSR1 CAC2Q04199 468 aa7.8□□□□□ -1.16
LSR1LSR1 NOC4Q06512 552 aaPredicted RBP7.8□□□□□ -1.16
LSR1LSR1 THI73Q07904 523 aa7.8□□□□□ -1.16
LSR1LSR1 MCP1Q12106 302 aa7.8□□□□□ -1.16
LSR1LSR1 RLM1Q12224 676 aa7.8□□□□□ -1.16
LSR1LSR1 EAF3Q12432 401 aa7.8□□□□□ -1.16
LSR1LSR1 TY1A-DR3Q12441 440 aa7.8□□□□□ -1.16
LSR1LSR1 RRI1Q12468 440 aa7.8□□□□□ -1.16
LSR1LSR1 RPS13P05756 151 aaKnown RBP7.79□□□□□ -1.16
LSR1LSR1 ZRC1P20107 442 aa7.79□□□□□ -1.16
LSR1LSR1 CPR2P23285 205 aa7.79□□□□□ -1.16
LSR1LSR1 MRP20P32387 263 aa7.79□□□□□ -1.16
LSR1LSR1 DCG1P32460 244 aa7.79□□□□□ -1.16
LSR1LSR1 ATP3P38077 311 aaKnown RBP7.79□□□□□ -1.16
LSR1LSR1 MTC4P38335 694 aaKnown RBP7.79□□□□□ -1.16
LSR1LSR1 ASP1P38986 381 aaPredicted RBP7.79□□□□□ -1.16
LSR1LSR1 IDP2P41939 412 aa7.79□□□□□ -1.16
LSR1LSR1 YFR054CP43622 192 aa7.79□□□□□ -1.16
LSR1LSR1 GPI14P47088 403 aaKnown RBP7.79□□□□□ -1.16
LSR1LSR1 YJR111CP47148 283 aaKnown RBP7.79□□□□□ -1.16
LSR1LSR1 SNN1P48232 102 aa7.79□□□□□ -1.16
LSR1LSR1 YGL159WP53110 370 aa7.79□□□□□ -1.16
LSR1LSR1 YGR012WP53206 393 aa7.79□□□□□ -1.16
LSR1LSR1 OKP1P53298 406 aa7.79□□□□□ -1.16
LSR1LSR1 RSM27P53305 110 aa7.79□□□□□ -1.16
LSR1LSR1 FYV6P53913 173 aa7.79□□□□□ -1.16
LSR1LSR1 ODC1Q03028 310 aa7.79□□□□□ -1.16
LSR1LSR1 MRX8Q05473 314 aa7.79□□□□□ -1.16
LSR1LSR1 YOL073CQ08232 322 aa7.79□□□□□ -1.16
LSR1LSR1 CMC2Q3E7A4 109 aa7.79□□□□□ -1.16
LSR1LSR1 PCC1Q3E833 88 aa7.79□□□□□ -1.16
LSR1LSR1 MEX67Q99257 599 aaKnown RBP7.79□□□□□ -1.16
LSR1LSR1 ODC2Q99297 307 aa7.79□□□□□ -1.16
LSR1LSR1 DAT1P13483 248 aaKnown RBP7.78□□□□□ -1.16
LSR1LSR1 PET18P25362 215 aa7.78□□□□□ -1.16
LSR1LSR1 NAB2P32505 525 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16not detected
LSR1LSR1 FMT1P32785 401 aa7.78□□□□□ -1.16
LSR1LSR1 SPT10P35208 640 aa7.78□□□□□ -1.16
LSR1LSR1 YPC1P38298 316 aa7.78□□□□□ -1.16
LSR1LSR1 SHG1P38337 142 aa7.78□□□□□ -1.16
LSR1LSR1 POG1P40473 351 aa7.78□□□□□ -1.16
LSR1LSR1 AVT7P40501 490 aa7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 63.8 ms