RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 FGD4Q96M96 766 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 RAB34Q9BZG1 259 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 PCIF1Q9H4Z3 704 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 SIX2Q9NPC8 291 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 CHST7Q9NS84 486 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 CYP39A1Q9NYL5 469 aa14.72□□□□□ -0.05
SCARB2-227ENST00000640957 TAF1P21675 1872 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 CHMP2AO43633 222 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 RNF8O76064 485 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 VCAM1P19320 739 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 TAC1P20366 129 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 ADCY7P51828 1080 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 KRT17Q04695 432 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 CLEC4GQ6UXB4 293 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 SLFN11Q7Z7L1 901 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 PROM2Q8N271 834 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 CKAP2Q8WWK9 683 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 SEC14L1Q92503 715 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 REEP2Q9BRK0 252 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 A0A0G2JND7 137 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 NR3C1P04150 777 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 PYGBP11216 843 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 ADCY8P40145 1251 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 SSR1P43307 286 aaKnown RBP14.71□□□□□ -0.05
SCARB2-227ENST00000640957 WDR4P57081 412 aaKnown RBP14.71□□□□□ -0.05
SCARB2-227ENST00000640957 EPHA7Q15375 998 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 DGKHQ86XP1 1220 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 SCG3Q8WXD2 468 aaKnown RBP14.71□□□□□ -0.05
SCARB2-227ENST00000640957 DNAJC5Q9H3Z4 198 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 ZNF287Q9HBT7 754 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 AAASQ9NRG9 546 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 PHTF1Q9UMS5 762 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 WASF2Q9Y6W5 498 aa14.71□□□□□ -0.05
SCARB2-227ENST00000640957 TISP43B9A030 160 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 NVLO15381 856 aaKnown RBP14.7□□□□□ -0.06
SCARB2-227ENST00000640957 RASA1P20936 1047 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 TRAF1Q13077 416 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 KPNB1Q14974 876 aaKnown RBP14.7□□□□□ -0.06
SCARB2-227ENST00000640957 SNX30Q5VWJ9 437 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 EPM2AIP1Q7L775 607 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-227ENST00000640957 NRG4Q8WWG1 115 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 SLC35C1Q96A29 364 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 CAPN9O14815 690 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 PHF2O75151 1096 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 ATP6V1C1P21283 382 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 NEK3P51956 506 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 ZFYVE27Q5T4F4 411 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 DPY19L2P1Q6NXN4 242 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.7□□□□□ -0.06
SCARB2-227ENST00000640957 SLC25A41Q8N5S1 370 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 CDCA7Q9BWT1 371 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-227ENST00000640957 BHMT2Q9H2M3 363 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 RGL1Q9NZL6 768 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 LMCD1Q9NZU5 365 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 DUOX1Q9NRD9 1551 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 ZBED4O75132 1171 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 BANF1O75531 89 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 T-ENOLP0DO92 83 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 RARGP13631 454 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 KRT15P19012 456 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 ITGA8P53708 1063 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 CACNA2D1P54289 1103 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 GSTO1P78417 241 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 ROR2Q01974 943 aaKnown RBP14.7□□□□□ -0.06
SCARB2-227ENST00000640957 TSNAXIP1Q2TAA8 658 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 PRR16Q569H4 304 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 RAB3IPQ96QF0 476 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-227ENST00000640957 NARFQ9UHQ1 456 aa14.7□□□□□ -0.06
SCARB2-227ENST00000640957 ANKRD33BA6NCL7 494 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 GOLGA8SH3BPF8 625 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 GOLGA8MH3BSY2 632 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 GJB6O95452 261 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 BAG2O95816 211 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 FGRP09769 529 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 SPATA31D3P0C874 917 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 ZNF142P52746 1687 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-227ENST00000640957 SEL1L2Q5TEA6 688 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 SPATA31D4Q6ZUB0 917 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 CEP63Q96MT8 703 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 KLHL11Q9NVR0 708 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 RHBDL2Q9NX52 303 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 GRID1Q9ULK0 1009 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 SPATA31A5Q5VU36 1347 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 SPATA31A7Q8IWB4 1347 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 MYO3BQ8WXR4 1341 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 BHMG1C9JSJ3 638 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-227ENST00000640957 CLSTN1O94985 981 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 COILP38432 576 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-227ENST00000640957 CCNFP41002 786 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 SEPT2Q15019 361 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 KNOP1Q1ED39 458 aaKnown RBP14.69□□□□□ -0.06
SCARB2-227ENST00000640957 RNF207Q6ZRF8 634 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 SLC7A6OSQ96CW6 309 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-227ENST00000640957 ARMCX1Q9P291 453 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 PCDHA2Q9Y5H9 948 aa14.69□□□□□ -0.06
SCARB2-227ENST00000640957 ALDH3A1P30838 453 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 GPSM2P81274 684 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 USH1GQ495M9 461 aa14.68□□□□□ -0.06
SCARB2-227ENST00000640957 GBP7Q8N8V2 638 aaPredicted RBP14.68□□□□□ -0.06
SCARB2-227ENST00000640957 EIF1ADQ8N9N8 165 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms