RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 ZNF394Q53GI3 561 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 ALKBH5Q6P6C2 394 aaKnown RBP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 KCTD1Q719H9 257 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 MCF2L2Q86YR7 1114 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 AGGF1Q8N302 714 aaeCLIP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 DDHD1Q8NEL9 900 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 GJA10Q969M2 543 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 PAGR1Q9BTK6 254 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 NRDE2Q9H7Z3 1164 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 METTL5Q9NRN9 209 aaKnown RBP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 CLIC5Q9NZA1 410 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 ADAM22Q9P0K1 906 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 CIDEBQ9UHD4 219 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 ADAMTS1Q9UHI8 967 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 ANGPTL2Q9UKU9 493 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 SNX12Q9UMY4 172 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 ARL2BPQ9Y2Y0 163 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 H0YCG3 227 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 DDHD2O94830 711 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 PENKP01210 267 aaPredicted RBP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 SLC16A2P36021 539 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 PTDSS1P48651 473 aaKnown RBP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 CDK17Q00537 523 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 MDM2Q00987 491 aaPredicted RBP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 CYP4A11Q02928 519 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 ALCAMQ13740 583 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 COL9A3Q14050 684 aaPredicted RBP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 LRRC14Q15048 493 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 DLGAP5Q15398 846 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 UBE2SQ16763 222 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 AOC3Q16853 763 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 CCDC153Q494R4 210 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 ODR4Q5SWX8 454 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 SNX30Q5VWJ9 437 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 LRRC43Q8N309 656 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 DNAJC7Q99615 494 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 ETNK2Q9NVF9 386 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 LNPEPQ9UIQ6 1025 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 FBXL5Q9UKA1 691 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 IVNS1ABPQ9Y6Y0 642 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 COL5A2P05997 1499 aaPredicted RBP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 SPATA31A1Q5TZJ5 1347 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 PASKQ96RG2 1323 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 GLI3P10071 1580 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 LTN1O94822 1766 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 POTEMA6NI47 508 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 LRRC10BA6NIK2 292 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 E7ENQ6 273 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 CD44P16070 742 aaKnown RBP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 ABCB4P21439 1286 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 ERFP50548 548 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 CCR3P51677 355 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 EIF3BP55884 814 aaKnown RBP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 ITGB3BPQ13352 177 aaPredicted RBP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 SYDE2Q5VT97 1194 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 PDXDC1Q6P996 788 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 TMEM179Q6ZVK1 233 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 OTUD6AQ7L8S5 288 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 PATL1Q86TB9 770 aaKnown RBP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 SMYD1Q8NB12 490 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 GDAP1Q8TB36 358 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 PIP4K2CQ8TBX8 421 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 TTC1Q99614 292 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 TMEM206Q9H813 350 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 DCLRE1BQ9H816 532 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 PARVGQ9HBI0 331 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 MLXIPLQ9NP71 852 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 KBTBD4Q9NVX7 518 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 ZNF510Q9Y2H8 683 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 TDRKHQ9Y2W6 561 aaKnown RBP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 CNTNAP4Q9C0A0 1308 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 BCL9O00512 1426 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 TCP11X1B4DZS4 312 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 UBE2Q2LH0YL09 131 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 CASQ2O14958 399 aaPredicted RBP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 ZBED4O75132 1171 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 FTCDO95954 541 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 ITGA2BP08514 1039 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 FXR2P51116 673 aaKnown RBP eCLIP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 MYL7Q01449 175 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 PLCB3Q01970 1234 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 ITPK1Q13572 414 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 DOK7Q18PE1 504 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 SGSM1Q2NKQ1 1148 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 AGBL2Q5U5Z8 902 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 PDXDC2PQ6P474 469 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 CCDC62Q6P9F0 684 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 LRIG3Q6UXM1 1119 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 BARGINQ6ZT62 677 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 C16orf86Q6ZW13 317 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 SH3RF1Q7Z6J0 888 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 TMEM139Q8IV31 216 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 RIBC1Q8N443 379 aaPredicted RBP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 CAVIN3Q969G5 261 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.04□□□□□ -1.444e-7■■□□□ 14.5
SCARB2-218ENST00000639715 ASIC3Q9UHC3 531 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 CAPN9O14815 690 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 MAPK13O15264 365 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms