RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	HCFC1R1	Q9NWW0	138 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	CCDC69	A6NI79	296 aa		13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	MAN2B1	O00754	1011 aa		13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	XYLB	O75191	536 aa		13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	NR1I2	O75469	434 aa		13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	ECI2	O75521	394 aa		13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	ZIC2	O95409	532 aa	Predicted RBP	13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	C8A	P07357	584 aa		13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	MTERF2	Q49AM1	385 aa		13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	FUT10	Q6P4F1	479 aa		13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	RABGGTA	Q92696	567 aa		13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	MCRS1	Q96EZ8	462 aa		13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	MBOAT7	Q96N66	472 aa		13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	COLEC11	Q9BWP8	271 aa		13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	LSM14B	Q9BX40	385 aa	Known RBP	13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	AGPAT5	Q9NUQ2	364 aa		13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	FBXW11	Q9UKB1	542 aa		13.17	□□□□□ -0.3
PAX6-238	ENST00000638755	NBEA	Q8NFP9	2946 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	WDR81	Q562E7	1941 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	TMEM150B	A6NC51	233 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	SMCO2	A6NFE2	343 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	ARL5C	A6NH57	179 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	WDR64	B1ANS9	1081 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	ITGA4	P13612	1032 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	CNR2	P34972	360 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	CREM	Q03060	361 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	AP3B2	Q13367	1082 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	GRM2	Q14416	872 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	PABPC1L	Q4VXU2	614 aa	Known RBP	13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	JAKMIP3	Q5VZ66	844 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	TANGO2	Q6ICL3	276 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	ZNF410	Q86VK4	478 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	LONP2	Q86WA8	852 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	FAM3C	Q92520	227 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	GAD1	Q99259	594 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	IER2	Q9BTL4	223 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	BRD9	Q9H8M2	597 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	DISC1	Q9NRI5	854 aa		13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.16	□□□□□ -0.3
PAX6-238	ENST00000638755	GREB1	Q4ZG55	1949 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	TMEM8B	A6NDV4	472 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	GIPC1	O14908	333 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	CHMP2A	O43633	222 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	ZNF806	P0C7X5	589 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	CALM1	P0DP23	149 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	CALM2	P0DP24	149 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	CALM3	P0DP25	149 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	MLH1	P40692	756 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	SCNN1G	P51170	649 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	NOVA1	P51513	510 aa	Known RBP	13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	PTH1R	Q03431	593 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	DSC1	Q08554	894 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	TARBP2	Q15633	366 aa	Known RBP	13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	PRR16	Q569H4	304 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	UBXN11	Q5T124	520 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	CASC1	Q6TDU7	716 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	TMTC3	Q6ZXV5	915 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	SLC7A14	Q8TBB6	771 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	DNASE1L2	Q92874	299 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	ZFP42	Q96MM3	310 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	ADAM33	Q9BZ11	813 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	SMOC1	Q9H4F8	434 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	MIOS	Q9NXC5	875 aa		13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	DNMT3B	Q9UBC3	853 aa	Known RBP	13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	MRPS23	Q9Y3D9	190 aa	Known RBP	13.15	□□□□□ -0.3
PAX6-238	ENST00000638755	AKAP13	Q12802	2813 aa		13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	PRC1	O43663	620 aa		13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	TOP3B	O95985	862 aa	Known RBP	13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	SET	Q01105	290 aa	Predicted RBP	13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	GAS6	Q14393	721 aa		13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	RTP2	Q5QGT7	225 aa		13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	B4GALNT3	Q6L9W6	998 aa		13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	PLEKHM2	Q8IWE5	1019 aa		13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	SMG8	Q8ND04	991 aa	Known RBP	13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	CLSTN3	Q9BQT9	956 aa		13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	APOL6	Q9BWW8	343 aa		13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	RNF39	Q9H2S5	420 aa		13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	IFT122	Q9HBG6	1241 aa		13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	UBN1	Q9NPG3	1134 aa		13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	ADAM28	Q9UKQ2	775 aa		13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	KCNH3	Q9ULD8	1083 aa		13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	PIAS3	Q9Y6X2	628 aa		13.14	□□□□□ -0.31
PAX6-238	ENST00000638755	NOTCH4	Q99466	2003 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	IGKV6-21	A0A0C4DH24	114 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755		K7ESF4	209 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	TADA2A	O75478	443 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	CYP3A4	P08684	503 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	HOXA9	P31269	272 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	HOXA11	P31270	313 aa	Predicted RBP	13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	HOXC13	P31276	330 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	CLK2	P49760	499 aa	Known RBP	13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	ZNF252P-AS1	Q0IIN9	211 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	RNF43	Q68DV7	783 aa		13.13	□□□□□ -0.31
PAX6-238	ENST00000638755	PPP1R18	Q6NYC8	613 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms