RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 C5orf42Q9H799 3197 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 MTCL1Q9Y4B5 1905 aaKnown RBP15.21■□□□□ 0.02
PNKP-228ENST00000637325 MYO10Q9HD67 2058 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.2■□□□□ 0.02
PNKP-228ENST00000637325 TTLL13PA6NNM8 815 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 INPPL1O15357 1258 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 B4GALT3O60512 393 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 GLP2RO95838 553 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 CTSAP10619 480 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 LONP1P36776 959 aaKnown RBP15.2■□□□□ 0.02
PNKP-228ENST00000637325 RAD51AP2Q09MP3 1159 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 COASYQ13057 564 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 DCAF4L1Q3SXM0 396 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 HSCBQ8IWL3 235 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 COLGALT2Q8IYK4 626 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 SYT2Q8N9I0 419 aaPredicted RBP15.2■□□□□ 0.02
PNKP-228ENST00000637325 BCL7CQ8WUZ0 217 aaPredicted RBP15.2■□□□□ 0.02
PNKP-228ENST00000637325 COLEC11Q9BWP8 271 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 ZBP1Q9H171 429 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 C17orf75Q9HAS0 396 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 SNTG2Q9NY99 539 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 PRKAG3Q9UGI9 489 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 KCNG1Q9UIX4 513 aa15.2■□□□□ 0.02
PNKP-228ENST00000637325 PHLPP2Q6ZVD8 1323 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 MUC3AQ02505 3323 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 SFI1A8K8P3 1242 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 CLASP2O75122 1294 aaKnown RBP15.19■□□□□ 0.02
PNKP-228ENST00000637325 HSP90AA1P07900 732 aaKnown RBP15.19■□□□□ 0.02
PNKP-228ENST00000637325 GUCY2CP25092 1073 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 NPTX2P47972 431 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 SMTNP53814 917 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 RBM10P98175 930 aaKnown RBP15.19■□□□□ 0.02
PNKP-228ENST00000637325 GRIK3Q13003 919 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 SMAD2Q15796 467 aaKnown RBP15.19■□□□□ 0.02
PNKP-228ENST00000637325 TMEM119Q4V9L6 283 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 NT5DC1Q5TFE4 455 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 ATF7IP2Q5U623 682 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 DAW1Q8N136 415 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 SMRP1Q8NCR6 262 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 VN1R2Q8NFZ6 395 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 AUTS2Q8WXX7 1259 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 CASP10Q92851 521 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 SNX21Q969T3 373 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 POP1Q99575 1024 aaKnown RBP15.19■□□□□ 0.02
PNKP-228ENST00000637325 TMEM134Q9H6X4 195 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 KCND2Q9NZV8 630 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 DAXXQ9UER7 740 aaPredicted RBP15.19■□□□□ 0.02
PNKP-228ENST00000637325 RBM19Q9Y4C8 960 aaKnown RBP15.19■□□□□ 0.02
PNKP-228ENST00000637325 CLIC4Q9Y696 253 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 ZMYM2Q9UBW7 1377 aa15.19■□□□□ 0.02
PNKP-228ENST00000637325 SLC16A4O15374 487 aa15.18■□□□□ 0.02
PNKP-228ENST00000637325 STX6O43752 255 aa15.18■□□□□ 0.02
PNKP-228ENST00000637325 SLC12A3P55017 1021 aa15.18■□□□□ 0.02
PNKP-228ENST00000637325 CEBPZQ03701 1054 aaKnown RBP15.18■□□□□ 0.02
PNKP-228ENST00000637325 DSC1Q08554 894 aa15.18■□□□□ 0.02
PNKP-228ENST00000637325 RESTQ13127 1097 aa15.18■□□□□ 0.02
PNKP-228ENST00000637325 DHX8Q14562 1220 aaKnown RBP15.18■□□□□ 0.02
PNKP-228ENST00000637325 EEF1DP3Q658K8 133 aa15.18■□□□□ 0.02
PNKP-228ENST00000637325 ANKRD54Q6NXT1 300 aa15.18■□□□□ 0.02
PNKP-228ENST00000637325 TMEM184AQ6ZMB5 413 aa15.18■□□□□ 0.02
PNKP-228ENST00000637325 ADHFE1Q8IWW8 467 aa15.18■□□□□ 0.02
PNKP-228ENST00000637325 EMILIN2Q9BXX0 1053 aa15.18■□□□□ 0.02
PNKP-228ENST00000637325 MRPL4Q9BYD3 311 aaKnown RBP15.18■□□□□ 0.02
PNKP-228ENST00000637325 CD320Q9NPF0 282 aa15.18■□□□□ 0.02
PNKP-228ENST00000637325 MRPL17Q9NRX2 175 aaKnown RBP15.18■□□□□ 0.02
PNKP-228ENST00000637325 GDAQ9Y2T3 454 aa15.18■□□□□ 0.02
PNKP-228ENST00000637325 RECQL4O94761 1208 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 EDN1P05305 212 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 KRT18P05783 430 aaKnown RBP15.17■□□□□ 0.02
PNKP-228ENST00000637325 URODP06132 367 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 PLS3P13797 630 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 MARCKSP29966 332 aaPredicted RBP15.17■□□□□ 0.02
PNKP-228ENST00000637325 GRIN1Q05586 938 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 ZP2Q05996 745 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 STRN3Q13033 797 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 MAPK7Q13164 816 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 KARSQ15046 597 aaKnown RBP15.17■□□□□ 0.02
PNKP-228ENST00000637325 TPRNQ4KMQ1 711 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 FAM173BQ6P4H8 233 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 PPFIBP1Q86W92 1011 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 GPBP1Q86WP2 473 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 GSTCDQ8NEC7 633 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 TCHPQ9BT92 498 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 HERC2P3Q9BVR0 1158 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 APOL5Q9BWW9 433 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 VN1R3Q9BXE9 311 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 ZSCAN16Q9H4T2 348 aaPredicted RBP15.17■□□□□ 0.02
PNKP-228ENST00000637325 ARHGAP28Q9P2N2 729 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 MTMR6Q9Y217 621 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 TNFSF13BQ9Y275 285 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 SSX2IPQ9Y2D8 614 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 USP15Q9Y4E8 981 aaPredicted RBP15.17■□□□□ 0.02
PNKP-228ENST00000637325 HCFC2Q9Y5Z7 792 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 IRAK3Q9Y616 596 aa15.17■□□□□ 0.02
PNKP-228ENST00000637325 PDCD11Q14690 1871 aaKnown RBP15.16■□□□□ 0.02
PNKP-228ENST00000637325 NPHP3-ACAD11A0A0J9YXS1 232 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 SPDYE4A6NLX3 237 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 C2CD2LO14523 706 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 TADA2AO75478 443 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 SOD2P04179 222 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms