RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 IL16Q14005 1332 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 SH3TC1Q8TE82 1336 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 ZNF541Q9H0D2 1346 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 FANCIQ9NVI1 1328 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 PMM2O15305 246 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 PPP1R11O60927 126 aaPredicted RBP8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 PPFIA4O75335 1185 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 TOMM70O94826 608 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 SDHAP31040 664 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 GJA4P35212 333 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 USP14P54578 494 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 GJA9P57773 515 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 SRSF2Q01130 221 aaKnown RBP8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 MOGSQ13724 837 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 CPSF6Q16630 551 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 GRAMD1BQ3KR37 738 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 ATAT1Q5SQI0 421 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 CYP4F22Q6NT55 531 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 SRGAP1Q7Z6B7 1085 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 CATIPQ7Z7H3 387 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 CXorf67Q86X51 503 aaPredicted RBP8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 FAM193BQ96PV7 902 aaPredicted RBP8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 MTA3Q9BTC8 594 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 CD244Q9BZW8 370 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 HYPKQ9NX55 129 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 DNM3Q9UQ16 869 aa8.39□□□□□ -1.07
SMARCA2-244ENST00000635659 TRPM7Q96QT4 1865 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 FADS2P1A8MWK0 482 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 ELL2O00472 640 aaPredicted RBP8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 FUCA1P04066 466 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 RHCEP18577 417 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 C5AR1P21730 350 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 PAX3P23760 479 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 ALDH1B1P30837 517 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 RHDQ02161 417 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 ADCY1Q08828 1119 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 ZNF267Q14586 743 aaPredicted RBP8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 TMEM132BQ14DG7 1078 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 SEC23AQ15436 765 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 EMC4Q5J8M3 183 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 TOGARAM2Q6ZUX3 1019 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 RPGRQ92834 1020 aaKnown RBP8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 HPS3Q969F9 1004 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 GJA10Q969M2 543 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 MAP6Q96JE9 813 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 CRAMP1Q96RY5 1269 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 KCNG1Q9UIX4 513 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 PHTF1Q9UMS5 762 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 DAAM1Q9Y4D1 1078 aa8.38□□□□□ -1.07
SMARCA2-244ENST00000635659 ZNF521Q96K83 1311 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 TMEM265A0A087WTH1 108 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 A0A1W2PQ45 241 aaPredicted RBP8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 A0A1W2PQY0 241 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 RASSF10A6NK89 507 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 WIPF1O43516 503 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 MAFKO60675 156 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 POU2F2P09086 479 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 EPHA5P54756 1037 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 MANFP55145 182 aaKnown RBP8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 TOR2AQ5JU69 321 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 LILRA6Q6PI73 481 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 KCTD1Q719H9 257 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 KCNK18Q7Z418 384 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 SLCO6A1Q86UG4 719 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 RTKN2Q8IZC4 609 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 DIS3LQ8TF46 1054 aaKnown RBP8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 JMJD8Q96S16 334 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 DBNDD2Q9BQY9 259 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 OSBPL1AQ9BXW6 950 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 GTPBP4Q9BZE4 634 aaKnown RBP8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 ATP13A1Q9HD20 1204 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 KLHL11Q9NVR0 708 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 RWDD3Q9Y3V2 267 aa8.37□□□□□ -1.07
SMARCA2-244ENST00000635659 CCDC189A1A4V9 331 aa8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 TPP1O14773 563 aa8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 ZBED1O96006 694 aa8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 HRGP04196 525 aa8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 TMEM253P0C7T8 217 aa8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 MTHFD2P13995 350 aa8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 CATSPEREQ5SY80 951 aa8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 PRR23CQ6ZRP0 262 aa8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 LZTR1Q8N653 840 aa8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 NETO1Q8TDF5 533 aa8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 RBM17Q96I25 401 aaKnown RBP8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 HHIPL1Q96JK4 782 aa8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 G6PC3Q9BUM1 346 aa8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 QRSL1Q9H0R6 528 aaKnown RBP8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 FAM204AQ9H8W3 233 aa8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 PUF60Q9UHX1 559 aaKnown RBP8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 TRMT112Q9UI30 125 aaKnown RBP8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 ATP6V0A2Q9Y487 856 aa8.36□□□□□ -1.07
SMARCA2-244ENST00000635659 A6NNZ2 444 aa8.35□□□□□ -1.07
SMARCA2-244ENST00000635659 BUB1BO60566 1050 aaPredicted RBP8.35□□□□□ -1.07
SMARCA2-244ENST00000635659 NDUFS2O75306 463 aa8.35□□□□□ -1.07
SMARCA2-244ENST00000635659 DDNO94850 711 aaPredicted RBP8.35□□□□□ -1.07
SMARCA2-244ENST00000635659 OSMP13725 252 aa8.35□□□□□ -1.07
SMARCA2-244ENST00000635659 VEGFAP15692 232 aaPredicted RBP8.35□□□□□ -1.07
SMARCA2-244ENST00000635659 SERPINB3P29508 390 aa8.35□□□□□ -1.07
SMARCA2-244ENST00000635659 MRPS9P82933 396 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms