RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 SLC9A7Q96T83 725 aa18.2■□□□□ 0.5
CDC42EP4-209ENST00000630622 TCHPQ9BT92 498 aa18.2■□□□□ 0.5
CDC42EP4-209ENST00000630622 GBP3Q9H0R5 595 aa18.2■□□□□ 0.5
CDC42EP4-209ENST00000630622 TMEM161AQ9NX61 479 aa18.2■□□□□ 0.5
CDC42EP4-209ENST00000630622 MEIS3P2A8K0S8 358 aa18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 PPP1R3GB7ZBB8 358 aa18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 FAM189A1O60320 539 aa18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 KIF20AO95235 890 aa18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 EOMESO95936 686 aa18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 RANBP2P49792 3224 aaKnown RBP18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 PRPF38BQ5VTL8 546 aaKnown RBP18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 SLFN12LQ6IEE8 588 aa18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 APBB1IPQ7Z5R6 666 aaPredicted RBP18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 TMCO2Q7Z6W1 182 aaPredicted RBP18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 TDHQ8IZJ6 230 aa18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 PHOSPHO2Q8TCD6 241 aa18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 TRIM6Q9C030 488 aaPredicted RBP18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 RNF39Q9H2S5 420 aa18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 AGPAT3Q9NRZ7 376 aa18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 RNF19AQ9NV58 838 aa18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 TYW1Q9NV66 732 aaKnown RBP18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 HES2Q9Y543 173 aa18.19■□□□□ 0.5
CDC42EP4-209ENST00000630622 FNDC1Q4ZHG4 1894 aaPredicted RBP18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 GBF1Q92538 1859 aa18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 ATP2A2P16615 1042 aaKnown RBP18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 GARTP22102 1010 aa18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 GRM5P41594 1212 aa18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 SNRPFP62306 86 aaKnown RBP18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 ZCWPW2Q504Y3 356 aa18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 AGMOQ6ZNB7 445 aa18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 CEP120Q8N960 986 aa18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 LPPQ93052 612 aa18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 CBWD1Q9BRT8 395 aa18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 MSTO1Q9BUK6 570 aa18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 SEMA6BQ9H3T3 888 aa18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 CGNQ9P2M7 1197 aaKnown RBP18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 PCDHB7Q9Y5E2 793 aa18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 CITO14578 2027 aa18.18■□□□□ 0.5
CDC42EP4-209ENST00000630622 PDXKO00764 312 aa18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 OGTO15294 1046 aa18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 UPP2O95045 317 aa18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 STAG3L1P0CL83 205 aa18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 HARSP12081 509 aaKnown RBP18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 IBSPP21815 317 aaPredicted RBP18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 MATR3P43243 847 aaKnown RBP eCLIP18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 NLRP12P59046 1061 aa18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 FAM109BQ6ICB4 259 aaPredicted RBP18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 CENPPQ6IPU0 288 aa18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 HS2ST1Q7LGA3 356 aa18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 HERC6Q8IVU3 1022 aa18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 C12orf56Q8IXR9 622 aa18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 TMEM192Q8IY95 271 aa18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 RNF169Q8NCN4 708 aa18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 POMGNT1Q8WZA1 660 aa18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 RNF216Q9NWF9 866 aaPredicted RBP18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 LRFN2Q9ULH4 789 aa18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 RALGAPA2Q2PPJ7 1873 aa18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 LAMA2P24043 3122 aaKnown RBP18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 TRIP11Q15643 1979 aa18.17■□□□□ 0.5
CDC42EP4-209ENST00000630622 ANK1P16157 1881 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 CLIC2O15247 247 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 RECQL4O94761 1208 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 GJB5O95377 273 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 ITGA4P13612 1032 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 PPP1R2P41236 205 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 DPCR1Q3MIW9 517 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 SEZ6Q53EL9 994 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 CLLU1OSQ5K130 101 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 ZBTB41Q5SVQ8 909 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 ARMCX5Q6P1M9 558 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 THNSL1Q8IYQ7 743 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 HACE1Q8IYU2 909 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 MLKLQ8NB16 471 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 ZSWIM2Q8NEG5 633 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 GOLGA5Q8TBA6 731 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 TMEM174Q8WUU8 243 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 PGBD4Q96DM1 585 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 DHTKD1Q96HY7 919 aaPredicted RBP18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 APOL6Q9BWW8 343 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 RC3H2Q9HBD1 1191 aaKnown RBP18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 SNTG2Q9NY99 539 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 AGO2Q9UKV8 859 aaKnown RBP18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 COLQQ9Y215 455 aaPredicted RBP18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 TRAF3IP3Q9Y228 551 aa18.16■□□□□ 0.5
CDC42EP4-209ENST00000630622 PSMA7O14818 248 aa18.15■□□□□ 0.5
CDC42EP4-209ENST00000630622 MEFVO15553 781 aaPredicted RBP18.15■□□□□ 0.5
CDC42EP4-209ENST00000630622 DGKIO75912 1065 aa18.15■□□□□ 0.5
CDC42EP4-209ENST00000630622 FGFR1P11362 822 aa18.15■□□□□ 0.5
CDC42EP4-209ENST00000630622 AKAP5P24588 427 aa18.15■□□□□ 0.5
CDC42EP4-209ENST00000630622 GATMP50440 423 aa18.15■□□□□ 0.5
CDC42EP4-209ENST00000630622 PMS1P54277 932 aaKnown RBP18.15■□□□□ 0.5
CDC42EP4-209ENST00000630622 OSTNP61366 133 aa18.15■□□□□ 0.5
CDC42EP4-209ENST00000630622 HTRA4P83105 476 aaPredicted RBP18.15■□□□□ 0.5
CDC42EP4-209ENST00000630622 STIM1Q13586 685 aa18.15■□□□□ 0.5
CDC42EP4-209ENST00000630622 FAM117BQ6P1L5 589 aa18.15■□□□□ 0.5
CDC42EP4-209ENST00000630622 CRELD2Q6UXH1 353 aaPredicted RBP18.15■□□□□ 0.5
CDC42EP4-209ENST00000630622 SLC9A9Q8IVB4 645 aa18.15■□□□□ 0.5
CDC42EP4-209ENST00000630622 ZNF689Q96CS4 500 aaPredicted RBP18.15■□□□□ 0.5
CDC42EP4-209ENST00000630622 CCDC94Q9BW85 323 aaPredicted RBP18.15■□□□□ 0.5
CDC42EP4-209ENST00000630622 PCIF1Q9H4Z3 704 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms