RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
SCARNA4-201ENST00000629045 PUS7LQ9H0K6 701 aaKnown RBP3.31□□□□□ -1.88
SCARNA4-201ENST00000629045 PCDH12Q9NPG4 1184 aa3.31□□□□□ -1.88
SCARNA4-201ENST00000629045 CEP72Q9P209 647 aa3.31□□□□□ -1.88
SCARNA4-201ENST00000629045 ANKRD62A6NC57 917 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 GABRDO14764 452 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 XPOTO43592 962 aaKnown RBP3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 MFAP3LO75121 409 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 AGXTP21549 392 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 PTPN7P35236 360 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 MCAMP43121 646 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 SLC5A3P53794 718 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 SLC25A3Q00325 362 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 ITKQ08881 620 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 FAPQ12884 760 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 TOB2Q14106 344 aaPredicted RBP3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 SEPT2Q15019 361 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 ACAP2Q15057 778 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 CSRP2Q16527 193 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 C19orf54Q5BKX5 351 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 MUM1L1Q5H9M0 696 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 MIIPQ5JXC2 388 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 SYDE2Q5VT97 1194 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 PGM2L1Q6PCE3 622 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 TMPRSS6Q8IU80 811 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 AMOTL1Q8IY63 956 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 GSPT2Q8IYD1 628 aaKnown RBP3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 FAM177A1Q8N128 213 aaPredicted RBP3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 THEMISQ8N1K5 641 aaPredicted RBP3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 C1orf162Q8NEQ5 155 aaPredicted RBP3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 GPR156Q8NFN8 814 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 OR52N2Q8NGI0 321 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 SLC35B2Q8TB61 432 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 HOXB13Q92826 284 aaPredicted RBP3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 RAB24Q969Q5 203 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 ZNF503Q96F45 646 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 UHRF1Q96T88 793 aaPredicted RBP3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 PDCD2LQ9BRP1 358 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 MENTQ9BUN1 341 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 SCAND2PQ9GZW5 306 aaPredicted RBP3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 GREM2Q9H772 168 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 ZNF277Q9NRM2 450 aaPredicted RBP3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 RBM12Q9NTZ6 932 aaKnown RBP3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 MKS1Q9NXB0 559 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 TUBD1Q9UJT1 453 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 ZBTB21Q9ULJ3 1066 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 DNM3Q9UQ16 869 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 HDAC5Q9UQL6 1122 aa3.3□□□□□ -1.88
SCARNA4-201ENST00000629045 TRIM75PA6NK02 468 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 FZD9O00144 591 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 PCDHGA12O60330 932 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 RPS6KA4O75676 772 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 ZNF202O95125 648 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 FSHBP01225 129 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 FPR1P21462 350 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 C5AR1P21730 350 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 APOBEC3AP31941 199 aaPredicted RBP3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 CRHR1P34998 444 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 SREBF1P36956 1147 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 SLC6A9P48067 706 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 PCBP2Q15366 365 aaKnown RBP eCLIP3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 PTPROQ16827 1216 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 DCAF17Q5H9S7 520 aaPredicted RBP3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 FNDC7Q5VTL7 733 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 HTR3DQ70Z44 454 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 DOK3Q7L591 496 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 SYT12Q8IV01 421 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 PQLC1Q8N2U9 271 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 OR7D4Q8NG98 312 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 STON2Q8WXE9 905 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 JADE3Q92613 823 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 DPF2Q92785 391 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 FATE1Q969F0 183 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 ADI1Q9BV57 179 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 KCNH6Q9H252 994 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 SPON1Q9HCB6 807 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 SLC2A4RGQ9NR83 387 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 SORCS3Q9UPU3 1222 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 RUVBL1Q9Y265 456 aaKnown RBP3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 SIK3Q9Y2K2 1263 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 PCDHGA9Q9Y5G4 932 aaKnown RBP3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 PCDHGA8Q9Y5G5 932 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 PCDHGA7Q9Y5G6 932 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 PCDHGA6Q9Y5G7 932 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 PCDHGA3Q9Y5H0 932 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 HS3ST3A1Q9Y663 406 aa3.29□□□□□ -1.88
SCARNA4-201ENST00000629045 ATRNL1Q5VV63 1379 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 XDHP47989 1333 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 LOC105371045A0A1W2PR82 267 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 GRXCR1A8MXD5 290 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 CXorf49A8MYA2 514 aaPredicted RBP3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 GOLGA6L6A8MZA4 724 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 PRR5-ARHGAP8B1AHC4 643 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 B5MCH6 92 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 LEFTY2O00292 366 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 PHF2O75151 1096 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 NDUFS2O75306 463 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 GASTP01350 101 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 ALOX15P16050 662 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms