RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 KCNT2Q6UVM3 1135 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 COLGALT1Q8NBJ5 622 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 GDPD5Q8WTR4 605 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 DHX58Q96C10 678 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 BICD1Q96G01 975 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 ACO2Q99798 780 aaKnown RBP15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 EIF2AQ9BY44 585 aaKnown RBP15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 CWH43Q9H720 699 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 TBC1D13Q9NVG8 400 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 SPG21Q9NZD8 308 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 CHD7Q9P2D1 2997 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 INPP5FQ9Y2H2 1132 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 TRANK1O15050 2925 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 NPHP3-ACAD11A0A0J9YXS1 232 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 FRMD3A2A2Y4 597 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 ARL5CA6NH57 179 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 MYMKA6NI61 221 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 HNRNPDLO14979 420 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 CLDN3O15551 220 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 LPXNO60711 386 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 PIGRP01833 764 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 SLFN14P0C7P3 912 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 IDEP14735 1019 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 LIG4P49917 911 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 GTF2BQ00403 316 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 ADGRE1Q14246 886 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 HSP90AA2PQ14568 343 aaPredicted RBP15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 NT5DC1Q5TFE4 455 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 SLFN12LQ6IEE8 588 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 DYMQ7RTS9 669 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 KLHL23Q8NBE8 558 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 LRRC15Q8TF66 581 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 LPPQ93052 612 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 TMEM169Q96HH4 297 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 PANK2Q9BZ23 570 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 NXF3Q9H4D5 531 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 MRPL44Q9H9J2 332 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 TBX20Q9UMR3 447 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 PLAGL2Q9UPG8 496 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 PCDHB13Q9Y5F0 798 aa15.35■□□□□ 0.05
SNRPA1-216ENST00000626000 A0A087X0B3 334 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 FAM237AA0A1B0GTK4 181 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 EPOPA6NHQ4 379 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 ZC3H11AO75152 810 aaKnown RBP eCLIP15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 FGF18O76093 207 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 ALDH2P05091 517 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 PROZP22891 400 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 GRM5P41594 1212 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 NOLC1Q14978 699 aaKnown RBP eCLIP15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 HERC4Q5GLZ8 1057 aaPredicted RBP15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 MAP4K3Q8IVH8 894 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 MRPS27Q92552 414 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 DNAJC19Q96DA6 116 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 TSPAN18Q96SJ8 248 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 GAD1Q99259 594 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 TRIM9Q9C026 710 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 NSUN3Q9H649 340 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 POLD4Q9HCU8 107 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 PTPRHQ9HD43 1115 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 PANK4Q9NVE7 773 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 PARP2Q9UGN5 583 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 TCHHQ07283 1943 aa15.34■□□□□ 0.05
SNRPA1-216ENST00000626000 CDH23Q9H251 3354 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 PVALEFA0A1B0GWK0 134 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 PFKFB1P16118 471 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 MLH1P40692 756 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 SYKP43405 635 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 BCAR1P56945 870 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 POU5F1Q01860 360 aaKnown RBP15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 MCL1Q07820 350 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 POSTNQ15063 836 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 KANK3Q6NY19 840 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 LRRC55Q6ZSA7 311 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 ZNF720Q7Z2F6 126 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 SFR1Q86XK3 245 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 SLC39A11Q8N1S5 342 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 CCDC47Q96A33 483 aaKnown RBP15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 C7orf25Q9BPX7 421 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 TARS2Q9BW92 718 aaKnown RBP15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 APOL6Q9BWW8 343 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 CDT1Q9H211 546 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 TMEM206Q9H813 350 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 NGRNQ9NPE2 291 aaKnown RBP15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 TLR9Q9NR96 1032 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 SLC38A7Q9NVC3 462 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 CHMP5Q9NZZ3 219 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 COG5Q9UP83 839 aa15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 TDRD15B5MCY1 1934 aaKnown RBP15.33■□□□□ 0.04
SNRPA1-216ENST00000626000 RFXAPO00287 272 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 RECQL4O94761 1208 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 ITGB1P05556 798 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 THP07101 528 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 MATR3P43243 847 aaKnown RBP eCLIP15.32■□□□□ 0.041e-7■■□□□ 11.4
SNRPA1-216ENST00000626000 ASIC1P78348 528 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 AAK1Q2M2I8 961 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 EEF1DP3Q658K8 133 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 TAS1R3Q7RTX0 852 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 SPRED2Q7Z698 418 aa15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 CDR2LQ86X02 465 aaPredicted RBP15.32■□□□□ 0.04
SNRPA1-216ENST00000626000 SPPL3Q8TCT6 385 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms