RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 PABPC1LQ4VXU2 614 aaKnown RBP11.78□□□□□ -0.52
VPS8-227ENST00000625842 FKBP1CQ5VVH2 108 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 IQSEC1Q6DN90 963 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 FBXL13Q8NEE6 735 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 SIK2Q9H0K1 926 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 MTMR4Q9NYA4 1195 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 AGAP1Q9UPQ3 857 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 KDM5AP29375 1690 aaKnown RBP11.78□□□□□ -0.52
VPS8-227ENST00000625842 RFX7Q2KHR2 1363 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.78□□□□□ -0.52
VPS8-227ENST00000625842 YWHABP31946 246 aaKnown RBP11.78□□□□□ -0.52
VPS8-227ENST00000625842 YWHAHQ04917 246 aaPredicted RBP11.78□□□□□ -0.52
VPS8-227ENST00000625842 ZNF177Q13360 481 aaPredicted RBP11.78□□□□□ -0.52
VPS8-227ENST00000625842 ZNF658Q5TYW1 1059 aaPredicted RBP11.78□□□□□ -0.52
VPS8-227ENST00000625842 EFCAB12Q6NXP0 572 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 HDXQ7Z353 690 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 ADCK2Q7Z695 626 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.78□□□□□ -0.52
VPS8-227ENST00000625842 DNERQ8NFT8 737 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 PUS7LQ9H0K6 701 aaKnown RBP11.78□□□□□ -0.52
VPS8-227ENST00000625842 SUDS3Q9H7L9 328 aaPredicted RBP11.78□□□□□ -0.52
VPS8-227ENST00000625842 C17orf75Q9HAS0 396 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 CHD1O14646 1710 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 GOLGA8IPA6NC78 632 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 BASP1P80723 227 aaKnown RBP11.78□□□□□ -0.52
VPS8-227ENST00000625842 RCN2Q14257 317 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 CDO1Q16878 200 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 IL31Q6EBC2 164 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 KIAA1468Q9P260 1216 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 VPS9D1Q9Y2B5 631 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 SLC15A5A6NIM6 579 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 UBXN8O00124 270 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 EBAG9O00559 213 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 FARP2O94887 1054 aaPredicted RBP11.78□□□□□ -0.52
VPS8-227ENST00000625842 ZNF131P52739 623 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 RASSF7Q02833 373 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 ANKS6Q68DC2 871 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 USP17L6PQ6QN14 398 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 ATG4CQ96DT6 458 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 SNX9Q9Y5X1 595 aa11.78□□□□□ -0.52
VPS8-227ENST00000625842 TBKBP1A7MCY6 615 aa11.77□□□□□ -0.52
VPS8-227ENST00000625842 C2CD2LO14523 706 aa11.77□□□□□ -0.52
VPS8-227ENST00000625842 SRGNP10124 158 aa11.77□□□□□ -0.52
VPS8-227ENST00000625842 SGCGQ13326 291 aa11.77□□□□□ -0.52
VPS8-227ENST00000625842 CTXN3Q4LDR2 81 aa11.77□□□□□ -0.52
VPS8-227ENST00000625842 UNC13DQ70J99 1090 aa11.77□□□□□ -0.52
VPS8-227ENST00000625842 RRM2BQ7LG56 351 aa11.77□□□□□ -0.52
VPS8-227ENST00000625842 ZNF558Q96NG5 402 aa11.77□□□□□ -0.52
VPS8-227ENST00000625842 MOV10L1Q9BXT6 1211 aaKnown RBP11.77□□□□□ -0.52
VPS8-227ENST00000625842 IGFLR1Q9H665 355 aa11.77□□□□□ -0.52
VPS8-227ENST00000625842 PPP1R9AQ9ULJ8 1098 aa11.77□□□□□ -0.52
VPS8-227ENST00000625842 PNPLA6Q8IY17 1366 aa11.77□□□□□ -0.52
VPS8-227ENST00000625842 ADGRB3O60242 1522 aa11.77□□□□□ -0.52
VPS8-227ENST00000625842 CKBP12277 381 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 TUFMP49411 452 aaKnown RBP11.77□□□□□ -0.53
VPS8-227ENST00000625842 PKN2Q16513 984 aaKnown RBP11.77□□□□□ -0.53
VPS8-227ENST00000625842 C10orf120Q5SQS8 335 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 CHSY1Q86X52 802 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 DCLK2Q8N568 766 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 ANKEF1Q9NU02 776 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 JAK2O60674 1132 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 ZC3H11AO75152 810 aaKnown RBP eCLIP11.77□□□□□ -0.53
VPS8-227ENST00000625842 CYP2C8P10632 490 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 SGSM1Q2NKQ1 1148 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 PAN2Q504Q3 1202 aaKnown RBP11.77□□□□□ -0.53
VPS8-227ENST00000625842 CAPNS2Q96L46 248 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 EFHD1Q9BUP0 239 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 DNAJC17Q9NVM6 304 aaKnown RBP11.77□□□□□ -0.53
VPS8-227ENST00000625842 MSH2P43246 934 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 RGS4P49798 205 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 OAZ1P54368 228 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 HERVK_113P62684 666 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 TGM3Q08188 693 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 ZNF543Q08ER8 600 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 HEATR6Q6AI08 1181 aaKnown RBP11.77□□□□□ -0.53
VPS8-227ENST00000625842 PIGOQ8TEQ8 1089 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 ABI2Q9NYB9 513 aaPredicted RBP11.77□□□□□ -0.53
VPS8-227ENST00000625842 TEKT2Q9UIF3 430 aa11.77□□□□□ -0.53
VPS8-227ENST00000625842 H0Y626 953 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 GNGT2O14610 69 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 PRPF4O43172 522 aaKnown RBP eCLIP11.76□□□□□ -0.53
VPS8-227ENST00000625842 LRRN2O75325 713 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 TPI1P60174 286 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 TTC31Q49AM3 519 aaPredicted RBP11.76□□□□□ -0.53
VPS8-227ENST00000625842 DCAF6Q58WW2 860 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 ZNF746Q6NUN9 644 aaPredicted RBP11.76□□□□□ -0.53
VPS8-227ENST00000625842 PPP4R4Q6NUP7 873 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 TMEM270Q6UE05 265 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 EMSYQ7Z589 1322 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 GLYCTKQ8IVS8 523 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 GLMNQ92990 594 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 EPS15L1Q9UBC2 864 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 HNRNPCL2B2RXH8 293 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 HNRNPCL1O60812 293 aaKnown RBP11.76□□□□□ -0.53
VPS8-227ENST00000625842 EYA4O95677 639 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 GUCA1AP43080 201 aaPredicted RBP11.76□□□□□ -0.53
VPS8-227ENST00000625842 PSMC1P62191 440 aaKnown RBP11.76□□□□□ -0.53
VPS8-227ENST00000625842 ATP11AP98196 1134 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 ATF7IP2Q5U623 682 aa11.76□□□□□ -0.53
VPS8-227ENST00000625842 ANGPTL8Q6UXH0 198 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms