RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 TPH2Q8IWU9 490 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 LRRC71Q8N4P6 559 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 FIBCD1Q8N539 461 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 FBXO18Q8NFZ0 1043 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 SLC7A3Q8WY07 619 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 HAS1Q92839 578 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 TNFRSF25Q93038 417 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 SAMD11Q96NU1 681 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 OSMRQ99650 979 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 KIF2CQ99661 725 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 FOXP1Q9H334 677 aaPredicted RBP7.15□□□□□ -1.26
TCF4-249ENST00000625716 AGO3Q9H9G7 860 aaKnown RBP7.15□□□□□ -1.26
TCF4-249ENST00000625716 C1orf112Q9NSG2 853 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 MARK1Q9P0L2 795 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 ST3GAL5Q9UNP4 418 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 NOC2LQ9Y3T9 749 aaKnown RBP7.15□□□□□ -1.26
TCF4-249ENST00000625716 RWDD3Q9Y3V2 267 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 PCDHB7Q9Y5E2 793 aa7.15□□□□□ -1.26
TCF4-249ENST00000625716 C1QTNF9BB2RNN3 333 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 H3BQV1 296 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 MAFO75444 373 aaPredicted RBP7.14□□□□□ -1.27
TCF4-249ENST00000625716 YWHABP31946 246 aaKnown RBP7.14□□□□□ -1.27
TCF4-249ENST00000625716 MCM7P33993 719 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 POLGP54098 1239 aaPredicted RBP7.14□□□□□ -1.27
TCF4-249ENST00000625716 ST3GAL1Q11201 340 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 ORC2Q13416 577 aaPredicted RBP7.14□□□□□ -1.27
TCF4-249ENST00000625716 BTG3Q14201 252 aaPredicted RBP7.14□□□□□ -1.27
TCF4-249ENST00000625716 ADGRE1Q14246 886 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 CTTNQ14247 550 aaKnown RBP7.14□□□□□ -1.27
TCF4-249ENST00000625716 PTPROQ16827 1216 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 XKR9Q5GH70 373 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 MCTP1Q6DN14 999 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 B3GNT9Q6UX72 402 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 LRRC69Q6ZNQ3 347 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 CD163Q86VB7 1156 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 NPAS4Q8IUM7 802 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 NOSTRINQ8IVI9 506 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 C4orf19Q8IY42 314 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 TMEM192Q8IY95 271 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 TPCN2Q8NHX9 752 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 NEK9Q8TD19 979 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 TRIM11Q96F44 468 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 DYDC2Q96IM9 177 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 CEP170P1Q96L14 293 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 ADAM2Q99965 735 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 LXNQ9BS40 222 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 GCOM2Q9BZD3 368 aaPredicted RBP7.14□□□□□ -1.27
TCF4-249ENST00000625716 INO80BQ9C086 356 aaPredicted RBP7.14□□□□□ -1.27
TCF4-249ENST00000625716 ZSWIM4Q9H7M6 989 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 TTC12Q9H892 705 aaPredicted RBP7.14□□□□□ -1.27
TCF4-249ENST00000625716 ERVK-5Q9HDB9 667 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 CYP26B1Q9NR63 512 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 SUCLA2Q9P2R7 463 aaPredicted RBP7.14□□□□□ -1.27
TCF4-249ENST00000625716 VAV3Q9UKW4 847 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 PPME1Q9Y570 386 aa7.14□□□□□ -1.27
TCF4-249ENST00000625716 KAT6AQ92794 2004 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 ADGRA3Q8IWK6 1321 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 TMEM150BA6NC51 233 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 GPR32O75388 356 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 POU3F3P20264 500 aaPredicted RBP7.13□□□□□ -1.27
TCF4-249ENST00000625716 SFPQP23246 707 aaKnown RBP eCLIP7.13□□□□□ -1.27
TCF4-249ENST00000625716 EIF4BP23588 611 aaKnown RBP7.13□□□□□ -1.27
TCF4-249ENST00000625716 CTNNB1P35222 781 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 TRAPPC10P48553 1259 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 SARSP49591 514 aaKnown RBP7.13□□□□□ -1.27
TCF4-249ENST00000625716 GPC3P51654 580 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 CYP4A11Q02928 519 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 SFSWAPQ12872 951 aaKnown RBP7.13□□□□□ -1.27
TCF4-249ENST00000625716 GRB10Q13322 594 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 GPM6BQ13491 265 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 TARBP2Q15633 366 aaKnown RBP7.13□□□□□ -1.27
TCF4-249ENST00000625716 ZNF174Q15697 407 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 EPC2Q52LR7 807 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 TTC38Q5R3I4 469 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 SPOUT1Q5T280 376 aaKnown RBP7.13□□□□□ -1.27
TCF4-249ENST00000625716 SLC24A5Q71RS6 500 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 ANO5Q75V66 913 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 RTN4RL1Q86UN2 441 aaPredicted RBP7.13□□□□□ -1.27
TCF4-249ENST00000625716 ZNF410Q86VK4 478 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 FAM228AQ86W67 206 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 RHPN2Q8IUC4 686 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 ERMNQ8TAM6 284 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 GDPD5Q8WTR4 605 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 TMEM40Q8WWA1 233 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 TCP11Q8WWU5 503 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 TMX3Q96JJ7 454 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 ZNF668Q96K58 619 aaPredicted RBP7.13□□□□□ -1.27
TCF4-249ENST00000625716 TBC1D32Q96NH3 1257 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 EIF2AK1Q9BQI3 630 aaKnown RBP7.13□□□□□ -1.27
TCF4-249ENST00000625716 SH2D3AQ9BRG2 576 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 C17orf80Q9BSJ5 609 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 ADAMTS10Q9H324 1103 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 ATP6V0A4Q9HBG4 840 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 RGS18Q9NS28 235 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 RGL1Q9NZL6 768 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 LMCD1Q9NZU5 365 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 SMC3Q9UQE7 1217 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.13□□□□□ -1.27
TCF4-249ENST00000625716 MTCH2Q9Y6C9 303 aa7.13□□□□□ -1.27
TCF4-249ENST00000625716 IGKV6-21A0A0C4DH24 114 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms