RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 ADGRD2Q7Z7M1 963 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 ZNF280BQ86YH2 543 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 SMRP1Q8NCR6 262 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 RNF39Q9H2S5 420 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 KMT5AQ9NQR1 393 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 CCDC39Q9UFE4 941 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 FBXO2Q9UK22 296 aaPredicted RBP13.69□□□□□ -0.22
LINC00963-217ENST00000624009 SSX2IPQ9Y2D8 614 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 FAN1Q9Y2M0 1017 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 CLIC4Q9Y696 253 aa13.69□□□□□ -0.22
LINC00963-217ENST00000624009 C2orf71A6NGG8 1288 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 CCDC169A6NNP5 214 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 TBX10O75333 385 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 DDHD2O94830 711 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 HOXB8P17481 243 aaPredicted RBP13.68□□□□□ -0.22
LINC00963-217ENST00000624009 DDIT3P35638 169 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 TXLNAP40222 546 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 PBX3P40426 434 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 AFF1P51825 1210 aaKnown RBP13.68□□□□□ -0.22
LINC00963-217ENST00000624009 ZRSR1Q15695 479 aaKnown RBP13.68□□□□□ -0.22
LINC00963-217ENST00000624009 SMAD2Q15796 467 aaKnown RBP13.68□□□□□ -0.22
LINC00963-217ENST00000624009 LONRF3Q496Y0 759 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 NT5DC1Q5TFE4 455 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 FAM178BQ8IXR5 827 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 RNF168Q8IYW5 571 aaPredicted RBP13.68□□□□□ -0.22
LINC00963-217ENST00000624009 VPS52Q8N1B4 723 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 TMEM161BQ8NDZ6 487 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 LARP4BQ92615 738 aaKnown RBP13.68□□□□□ -0.22
LINC00963-217ENST00000624009 RAD54LQ92698 747 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 ACO2Q99798 780 aaKnown RBP13.68□□□□□ -0.22
LINC00963-217ENST00000624009 PTPRHQ9HD43 1115 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 BLOC1S4Q9NUP1 217 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 CLEC1BQ9P126 229 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 DNAJB4Q9UDY4 337 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 CD207Q9UJ71 328 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 HES2Q9Y543 173 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.68□□□□□ -0.22
LINC00963-217ENST00000624009 MYO10Q9HD67 2058 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 TCHHQ07283 1943 aa13.68□□□□□ -0.22
LINC00963-217ENST00000624009 TTLL13PA6NNM8 815 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 H3BQ06 376 aaPredicted RBP13.67□□□□□ -0.22
LINC00963-217ENST00000624009 NRP1O14786 923 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 B4GALT3O60512 393 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 GLP2RO95838 553 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 POMCP01189 267 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 SOD2P04179 222 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 HSP90AA1P07900 732 aaKnown RBP13.67□□□□□ -0.22
LINC00963-217ENST00000624009 MCF2P10911 925 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 PLCG1P19174 1290 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 PROZP22891 400 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 GTF2F1P35269 517 aaKnown RBP eCLIP13.67□□□□□ -0.221e-6■■■■■ 32
LINC00963-217ENST00000624009 NDUFV1P49821 464 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 SCNN1GP51170 649 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 NCKAP1LP55160 1127 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 STRN3Q13033 797 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 TUSC3Q13454 348 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 TMEM132AQ24JP5 1023 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 ARSHQ5FYA8 562 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 PLPP4Q5VZY2 271 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 ZPBP2Q6X784 338 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 PPFIBP1Q86W92 1011 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 TMEM173Q86WV6 379 aaPredicted RBP13.67□□□□□ -0.22
LINC00963-217ENST00000624009 KRI1Q8N9T8 703 aaKnown RBP13.67□□□□□ -0.22
LINC00963-217ENST00000624009 CASP10Q92851 521 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 ZFP42Q96MM3 310 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 ZNF396Q96N95 335 aaPredicted RBP13.67□□□□□ -0.22
LINC00963-217ENST00000624009 USP28Q96RU2 1077 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 RPS6KC1Q96S38 1066 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 POP1Q99575 1024 aaKnown RBP13.67□□□□□ -0.22
LINC00963-217ENST00000624009 KIFC3Q9BVG8 833 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 IGFLR1Q9H665 355 aa13.67□□□□□ -0.22
LINC00963-217ENST00000624009 TOPORSQ9NS56 1045 aaPredicted RBP13.67□□□□□ -0.22
LINC00963-217ENST00000624009 ZDBF2Q9HCK1 2354 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 HIDE1A8MVS5 230 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 NT5C1B-RDH14C9J2C7 533 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 MBTPS2O43462 519 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 PPP6R2O75170 966 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 TOM1L1O75674 476 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 YEATS4O95619 227 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 EDN1P05305 212 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 SSBP05455 408 aaKnown RBP eCLIP13.66□□□□□ -0.22
LINC00963-217ENST00000624009 THP07101 528 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 MAPTP10636 758 aaKnown RBP13.66□□□□□ -0.22
LINC00963-217ENST00000624009 AKAP5P24588 427 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 MARCKSP29966 332 aaPredicted RBP13.66□□□□□ -0.22
LINC00963-217ENST00000624009 GRIN1Q05586 938 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 DLX2Q07687 328 aaPredicted RBP13.66□□□□□ -0.22
LINC00963-217ENST00000624009 KARSQ15046 597 aaKnown RBP13.66□□□□□ -0.22
LINC00963-217ENST00000624009 XKR4Q5GH76 650 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 CCDC73Q6ZRK6 1079 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 TAS1R3Q7RTX0 852 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 GPBP1Q86WP2 473 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 LINC00301Q8NCQ3 95 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 RASSF8Q8NHQ8 419 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 REEP2Q9BRK0 252 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 COLEC11Q9BWP8 271 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 VN1R3Q9BXE9 311 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 GBP3Q9H0R5 595 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 ST6GALNAC4Q9H4F1 302 aa13.66□□□□□ -0.22
LINC00963-217ENST00000624009 PARVGQ9HBI0 331 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms