RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 POLIQ9UNA4 740 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 ST3GAL5Q9UNP4 418 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 CRYBG3Q68DQ2 2970 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 PHLPP2Q6ZVD8 1323 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 CSMD1Q96PZ7 3565 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 MED13Q9UHV7 2174 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 COL4A2P08572 1712 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 TGM5O43548 720 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 CBFA2T3O75081 653 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 DKK1O94907 266 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 APBB3O95704 486 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 GALTP07902 379 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 SYPP08247 313 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 SERPINF2P08697 491 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 ATXN1LP0C7T5 689 aaKnown RBP7.47□□□□□ -1.21
CDKL5-204ENST00000623364 PYGBP11216 843 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 PSMC3P17980 439 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 HOXD12P35452 270 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 SRSF11Q05519 484 aaKnown RBP7.47□□□□□ -1.21
CDKL5-204ENST00000623364 DUOXA1Q1HG43 343 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 WDR44Q5JSH3 913 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 UTP14CQ5TAP6 766 aaKnown RBP7.47□□□□□ -1.21
CDKL5-204ENST00000623364 ARHGEF16Q5VV41 709 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 LPCAT2Q7L5N7 544 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 OR2I1PQ8NGU4 316 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 SETD7Q8WTS6 366 aaKnown RBP7.47□□□□□ -1.21
CDKL5-204ENST00000623364 SNRNP27Q8WVK2 155 aaKnown RBP7.47□□□□□ -1.21
CDKL5-204ENST00000623364 CEP95Q96GE4 821 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 HIC2Q96JB3 615 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 TAAR1Q96RJ0 339 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 FSCN3Q9NQT6 498 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 TMPRSS4Q9NRS4 437 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 ATP8A2Q9NTI2 1148 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 SMC4Q9NTJ3 1288 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 TMEM74BQ9NUR3 256 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 MTMR4Q9NYA4 1195 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 PCOLCE2Q9UKZ9 415 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 GINS2Q9Y248 185 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 NOC2LQ9Y3T9 749 aaKnown RBP7.47□□□□□ -1.21
CDKL5-204ENST00000623364 ABCB11O95342 1321 aa7.47□□□□□ -1.21
CDKL5-204ENST00000623364 ATRQ13535 2644 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 GOLGA8CPA6NN73 597 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 ARHGAP33O14559 1287 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 VAMP4O75379 141 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 NR3C2P08235 984 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 DGKEP52429 567 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 FOXK1P85037 733 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 SP2Q02086 613 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 WDR43Q15061 677 aaKnown RBP eCLIP7.46□□□□□ -1.22
CDKL5-204ENST00000623364 PON2Q15165 354 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 USH1GQ495M9 461 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 PABPC1LQ4VXU2 614 aaKnown RBP7.46□□□□□ -1.22
CDKL5-204ENST00000623364 MARCH8Q5T0T0 291 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 PKN3Q6P5Z2 889 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 XKR5Q6UX68 686 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 RABEPKQ7Z6M1 372 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 TMPRSS12Q86WS5 348 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 RALGPS2Q86X27 583 aaPredicted RBP7.46□□□□□ -1.22
CDKL5-204ENST00000623364 ECHDC2Q86YB7 292 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 NME8Q8N427 588 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 ZNF248Q8NDW4 579 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 RGS22Q8NE09 1264 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 PI4K2BQ8TCG2 481 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 RSPH1Q8WYR4 309 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 CDC6Q99741 560 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 TOR4AQ9NXH8 423 aa7.46□□□□□ -1.22
CDKL5-204ENST00000623364 MRPS23Q9Y3D9 190 aaKnown RBP7.46□□□□□ -1.22
CDKL5-204ENST00000623364 PDCD11Q14690 1871 aaKnown RBP7.46□□□□□ -1.22
CDKL5-204ENST00000623364 SPENQ96T58 3664 aaKnown RBP7.46□□□□□ -1.22
CDKL5-204ENST00000623364 BAZ2AQ9UIF9 1905 aaKnown RBP7.46□□□□□ -1.22
CDKL5-204ENST00000623364 IGKV6D-41A0A0C4DH26 115 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 VPS37CA5D8V6 355 aaPredicted RBP7.45□□□□□ -1.22
CDKL5-204ENST00000623364 RRN3P2A6NIE6 340 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 SLC38A8A6NNN8 435 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 SPECC1L-ADORA2AF8WAN1 911 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 SOD2P04179 222 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 ITGB2P05107 769 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 EIF2AK2P19525 551 aaKnown RBP7.45□□□□□ -1.22
CDKL5-204ENST00000623364 BCKDHBP21953 392 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 HNF1BP35680 557 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 DCTP40126 519 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 SOX9P48436 509 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 IGBP1P78318 339 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 G3BP1Q13283 466 aaKnown RBP eCLIP7.45□□□□□ -1.22
CDKL5-204ENST00000623364 RTP5Q14D33 572 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 PPM1LQ5SGD2 360 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 LIN9Q5TKA1 542 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 KIAA1614Q5VZ46 1190 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 ARMCX6Q7L4S7 300 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 EXD3Q8N9H8 876 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 DEPDC1BQ8WUY9 529 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 ZNF512BQ96KM6 892 aaPredicted RBP7.45□□□□□ -1.22
CDKL5-204ENST00000623364 LPIN3Q9BQK8 851 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 NRSN2Q9GZP1 204 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 MAF1Q9H063 256 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 PRDM16Q9HAZ2 1276 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 RXFP1Q9HBX9 757 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 DKK3Q9UBP4 350 aa7.45□□□□□ -1.22
CDKL5-204ENST00000623364 MYBPHLA2RUH7 354 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 CCL16O15467 120 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms