RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 CD44P16070 742 aaKnown RBP13.62□□□□□ -0.23
LINC00963-216ENST00000623185 CCNE1P24864 410 aa13.62□□□□□ -0.23
LINC00963-216ENST00000623185 WDR5P61964 334 aaKnown RBP13.62□□□□□ -0.23
LINC00963-216ENST00000623185 SHHQ15465 462 aa13.62□□□□□ -0.23
LINC00963-216ENST00000623185 EDRF1Q3B7T1 1238 aa13.62□□□□□ -0.23
LINC00963-216ENST00000623185 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.62□□□□□ -0.23
LINC00963-216ENST00000623185 CDR2LQ86X02 465 aaPredicted RBP13.62□□□□□ -0.23
LINC00963-216ENST00000623185 HACE1Q8IYU2 909 aa13.62□□□□□ -0.23
LINC00963-216ENST00000623185 SMG8Q8ND04 991 aaKnown RBP13.62□□□□□ -0.23
LINC00963-216ENST00000623185 RSPH1Q8WYR4 309 aa13.62□□□□□ -0.23
LINC00963-216ENST00000623185 POMGNT1Q8WZA1 660 aa13.62□□□□□ -0.23
LINC00963-216ENST00000623185 EIF2AQ9BY44 585 aaKnown RBP13.62□□□□□ -0.23
LINC00963-216ENST00000623185 TRIM6Q9C030 488 aaPredicted RBP13.62□□□□□ -0.23
LINC00963-216ENST00000623185 HAPLN2Q9GZV7 340 aa13.62□□□□□ -0.23
LINC00963-216ENST00000623185 SEMA6BQ9H3T3 888 aa13.62□□□□□ -0.23
LINC00963-216ENST00000623185 KIAA1586Q9HCI6 787 aa13.62□□□□□ -0.23
LINC00963-216ENST00000623185 AGPAT3Q9NRZ7 376 aa13.62□□□□□ -0.23
LINC00963-216ENST00000623185 DMAC2Q9NW81 257 aa13.62□□□□□ -0.23
LINC00963-216ENST00000623185 DACH1Q9UI36 760 aa13.62□□□□□ -0.23
LINC00963-216ENST00000623185 IPPQ9Y573 584 aa13.62□□□□□ -0.23
LINC00963-216ENST00000623185 SLC4A7Q9Y6M7 1214 aa13.62□□□□□ -0.23
LINC00963-216ENST00000623185 OGTO15294 1046 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 NPTXRO95502 500 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 RPL13P26373 211 aaKnown RBP13.61□□□□□ -0.23
LINC00963-216ENST00000623185 ERCC5P28715 1186 aaPredicted RBP13.61□□□□□ -0.23
LINC00963-216ENST00000623185 GRM5P41594 1212 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 KCNJ6P48051 423 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 LRRC63Q05C16 580 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 NOLC1Q14978 699 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC00963-216ENST00000623185 ZNF568Q3ZCX4 644 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 ANKRD40Q6AI12 368 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 ARMCX5Q6P1M9 558 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 ZBTB33Q86T24 672 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 NPAS4Q8IUM7 802 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 P2RX5Q93086 422 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 CDT1Q9H211 546 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 IKZF4Q9H2S9 585 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 ANO10Q9NW15 660 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 PCDH10Q9P2E7 1040 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 AGO2Q9UKV8 859 aaKnown RBP13.61□□□□□ -0.23
LINC00963-216ENST00000623185 GIT1Q9Y2X7 761 aa13.61□□□□□ -0.23
LINC00963-216ENST00000623185 BICDL2A1A5D9 508 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 TISP43B9A030 160 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 HOXA2O43364 376 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 FAM189A1O60320 539 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 ADRB2P07550 413 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 CLTAP09496 248 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 CCDC192P0DO97 292 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 ITGA4P13612 1032 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 MATR3P43243 847 aaKnown RBP eCLIP13.6□□□□□ -0.23
LINC00963-216ENST00000623185 FKBP3Q00688 224 aaKnown RBP13.6□□□□□ -0.23
LINC00963-216ENST00000623185 ADAM9Q13443 819 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 ZCWPW2Q504Y3 356 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 ALKAL1Q6UXT8 129 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 FBXL18Q96ME1 805 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 ACAP3Q96P50 834 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 TSPAN18Q96SJ8 248 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 SLC9A7Q96T83 725 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 TSG101Q99816 390 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 MSTO1Q9BUK6 570 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 CCDC94Q9BW85 323 aaPredicted RBP13.6□□□□□ -0.23
LINC00963-216ENST00000623185 PRO3102Q9H379 93 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 PLEKHA5Q9HAU0 1116 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 CXXC1Q9P0U4 656 aaPredicted RBP13.6□□□□□ -0.23
LINC00963-216ENST00000623185 ANKFY1Q9P2R3 1169 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 RWDD2AQ9UIY3 292 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 CPSF3Q9UKF6 684 aaKnown RBP13.6□□□□□ -0.23
LINC00963-216ENST00000623185 LRFN2Q9ULH4 789 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 MYH11P35749 1972 aa13.6□□□□□ -0.23
LINC00963-216ENST00000623185 ZMYM2Q9UBW7 1377 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 ZBBXA8MT70 800 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 CLIC2O15247 247 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 EXTL3O43909 919 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 DGKIO75912 1065 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 ATF7P17544 494 aaPredicted RBP13.59□□□□□ -0.23
LINC00963-216ENST00000623185 MCCD1P59942 119 aaPredicted RBP13.59□□□□□ -0.23
LINC00963-216ENST00000623185 PAK1Q13153 545 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 STX1AQ16623 288 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 DPCR1Q3MIW9 517 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 ZSCAN23Q3MJ62 389 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 XKR4Q5GH76 650 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 C9orf50Q5SZB4 431 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 CRELD2Q6UXH1 353 aaPredicted RBP13.59□□□□□ -0.23
LINC00963-216ENST00000623185 AGMOQ6ZNB7 445 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 CD302Q8IX05 232 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 THNSL1Q8IYQ7 743 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 GPD1LQ8N335 351 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 XXYLT1Q8NBI6 393 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 NELFBQ8WX92 580 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 CBWD1Q9BRT8 395 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 FUCA2Q9BTY2 467 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 RNF39Q9H2S5 420 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 PCIF1Q9H4Z3 704 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 SNTG2Q9NY99 539 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 HSPBP1Q9NZL4 362 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 KANSL3Q9P2N6 904 aa13.59□□□□□ -0.23
LINC00963-216ENST00000623185 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.58□□□□□ -0.24
LINC00963-216ENST00000623185 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.58□□□□□ -0.24
LINC00963-216ENST00000623185 SYCE3A1L190 88 aa13.58□□□□□ -0.24
LINC00963-216ENST00000623185 ZNF233A6NK53 670 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms