RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 BLMHQ13867 455 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 CCDC17Q96LX7 622 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 BFARQ9NZS9 450 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 AK5Q9Y6K8 562 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 ANKARQ7Z5J8 1434 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 GTPBP10A4D1E9 387 aaKnown RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 SGK1O00141 431 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 PALMO75781 387 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 LCA5LO95447 670 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 CLK1P49759 484 aaKnown RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 RBM12BQ8IXT5 1001 aaKnown RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 CCDC36Q8IYA8 594 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 PRDM16Q9HAZ2 1276 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 TRAPPC3O43617 180 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 LPXNO60711 386 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 ACSL3O95573 720 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 BCL10O95999 233 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 MYL6P60660 151 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 TRIP13Q15645 432 aaPredicted RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 HIF1AQ16665 826 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 COPS6Q7L5N1 327 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 ZKSCAN4Q969J2 545 aaPredicted RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 EYA3Q99504 573 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 PTTG2Q9NZH5 202 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 MCM8Q9UJA3 840 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 FANCAO15360 1455 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 B4E1Z4 1266 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 BAIAP3O94812 1187 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 SRGNP10124 158 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 COPB2P35606 906 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 RPS6KA3P51812 740 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 DMP1Q13316 513 aaPredicted RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 ARHGEF1Q92888 912 aaKnown RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 KATNAL1Q9BW62 490 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 SENP3Q9H4L4 574 aaPredicted RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 PSMD3O43242 534 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 SRGAP2CP0DJJ0 459 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 ATICP31939 592 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 IL12RB1P42701 662 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 KCNQ4P56696 695 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 PDCD4Q53EL6 469 aaKnown RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 ZNF677Q86XU0 584 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 AADATQ8N5Z0 425 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 AZI2Q9H6S1 392 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 MAGEE1Q9HCI5 957 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 TOM1L1O75674 476 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 OCM2P0CE71 109 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 OCMP0CE72 109 aaPredicted RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 PKN2Q16513 984 aaKnown RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 OTULINQ96BN8 352 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 ANKRD36BP1Q96IX9 119 aa6.77□□□□□ -1.33
ERCC6-209ENST00000623073 METTL5Q9NRN9 209 aaKnown RBP6.77□□□□□ -1.33
ERCC6-209ENST00000623073 BTBD18B2RXH4 712 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 POLGP54098 1239 aaPredicted RBP6.76□□□□□ -1.33
ERCC6-209ENST00000623073 SMYD5Q6GMV2 418 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 RNPC3Q96LT9 517 aaKnown RBP6.76□□□□□ -1.33
ERCC6-209ENST00000623073 ACCSQ96QU6 501 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 DCLK3Q9C098 648 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 EHD1Q9H4M9 534 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 LDHAP00338 332 aaKnown RBP6.76□□□□□ -1.33
ERCC6-209ENST00000623073 DNAJC3Q13217 504 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 TOP3AQ13472 1001 aaPredicted RBP6.76□□□□□ -1.33
ERCC6-209ENST00000623073 DGUOKQ16854 277 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 CCDC137Q6PK04 289 aaKnown RBP6.76□□□□□ -1.33
ERCC6-209ENST00000623073 NLRX1Q86UT6 975 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 TRIM59Q8IWR1 403 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 OSCP1Q8WVF1 389 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 SCYL1Q96KG9 808 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 TMBIM4Q9HC24 238 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 TUFT1Q9NNX1 390 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 SNRKQ9NRH2 765 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 VPS9D1Q9Y2B5 631 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 MYRFQ9Y2G1 1151 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 CAPN9O14815 690 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 ATP1A3P13637 1013 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 TXKP42681 527 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 BRDTQ58F21 947 aaPredicted RBP6.76□□□□□ -1.33
ERCC6-209ENST00000623073 SPANXN2Q5MJ10 180 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 ZBTB8OSQ8IWT0 167 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 ZCCHC7Q8N3Z6 543 aaKnown RBP6.76□□□□□ -1.33
ERCC6-209ENST00000623073 GRID1Q9ULK0 1009 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 HBS1LQ9Y450 684 aaKnown RBP6.76□□□□□ -1.33
ERCC6-209ENST00000623073 TMEM120BA0PK00 339 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 SHOX2O60902 331 aaPredicted RBP6.76□□□□□ -1.33
ERCC6-209ENST00000623073 DRG2P55039 364 aaKnown RBP6.76□□□□□ -1.33
ERCC6-209ENST00000623073 TBL3Q12788 808 aaKnown RBP6.76□□□□□ -1.33
ERCC6-209ENST00000623073 NAB1Q13506 487 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 NLRP3Q96P20 1036 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 KLHL25Q9H0H3 589 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 PICK1Q9NRD5 415 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 TAGLN3Q9UI15 199 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 ALBP02768 609 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 ATP6V1E1P36543 226 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 PPARAQ07869 468 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 SPOPLQ6IQ16 392 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 RWDD4Q6NW29 188 aaKnown RBP6.76□□□□□ -1.33
ERCC6-209ENST00000623073 SCUBE1Q8IWY4 988 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 MAGEB6Q8N7X4 407 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 KLHL31Q9H511 634 aa6.76□□□□□ -1.33
ERCC6-209ENST00000623073 GDF11O95390 407 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms