RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SLFN12LQ6IEE8 588 aa21.7■■□□□ 1.06
PDLIM2-221ENST00000622702 NOTUMQ6P988 496 aa21.7■■□□□ 1.06
PDLIM2-221ENST00000622702 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.7■■□□□ 1.06
PDLIM2-221ENST00000622702 C12orf56Q8IXR9 622 aa21.7■■□□□ 1.06
PDLIM2-221ENST00000622702 CPB2Q96IY4 423 aa21.7■■□□□ 1.06
PDLIM2-221ENST00000622702 PDZD7Q9H5P4 517 aa21.7■■□□□ 1.06
PDLIM2-221ENST00000622702 CTNND2Q9UQB3 1225 aa21.7■■□□□ 1.06
PDLIM2-221ENST00000622702 PIN4Q9Y237 131 aaKnown RBP21.7■■□□□ 1.06
PDLIM2-221ENST00000622702 BICDL2A1A5D9 508 aa21.69■■□□□ 1.06
PDLIM2-221ENST00000622702 TISP43B9A030 160 aa21.69■■□□□ 1.06
PDLIM2-221ENST00000622702 N4BP3O15049 544 aa21.69■■□□□ 1.06
PDLIM2-221ENST00000622702 CAVIN2O95810 425 aa21.69■■□□□ 1.06
PDLIM2-221ENST00000622702 PMS1P54277 932 aaKnown RBP21.69■■□□□ 1.06
PDLIM2-221ENST00000622702 DEFB103AP81534 67 aa21.69■■□□□ 1.06
PDLIM2-221ENST00000622702 NFIL3Q16649 462 aa21.69■■□□□ 1.06
PDLIM2-221ENST00000622702 TMEM132AQ24JP5 1023 aa21.69■■□□□ 1.06
PDLIM2-221ENST00000622702 EDRF1Q3B7T1 1238 aa21.69■■□□□ 1.06
PDLIM2-221ENST00000622702 TTI2Q6NXR4 508 aa21.69■■□□□ 1.06
PDLIM2-221ENST00000622702 MPZL3Q6UWV2 235 aa21.69■■□□□ 1.06
PDLIM2-221ENST00000622702 SLC9A7Q96T83 725 aa21.69■■□□□ 1.06
PDLIM2-221ENST00000622702 TSG101Q99816 390 aa21.69■■□□□ 1.06
PDLIM2-221ENST00000622702 NAT10Q9H0A0 1025 aaKnown RBP21.69■■□□□ 1.06
PDLIM2-221ENST00000622702 TMX1Q9H3N1 280 aa21.69■■□□□ 1.06
PDLIM2-221ENST00000622702 PTPRSQ13332 1948 aa21.68■■□□□ 1.06
PDLIM2-221ENST00000622702 CALUO43852 315 aaPredicted RBP21.68■■□□□ 1.06
PDLIM2-221ENST00000622702 GARTP22102 1010 aa21.68■■□□□ 1.06
PDLIM2-221ENST00000622702 ADSSP30520 456 aa21.68■■□□□ 1.06
PDLIM2-221ENST00000622702 MCL1Q07820 350 aa21.68■■□□□ 1.06
PDLIM2-221ENST00000622702 DSC3Q14574 896 aa21.68■■□□□ 1.06
PDLIM2-221ENST00000622702 EEF1DP3Q658K8 133 aa21.68■■□□□ 1.06
PDLIM2-221ENST00000622702 ANKRD40Q6AI12 368 aa21.68■■□□□ 1.06
PDLIM2-221ENST00000622702 PHOSPHO2Q8TCD6 241 aa21.68■■□□□ 1.06
PDLIM2-221ENST00000622702 ZBTB45Q96K62 511 aaPredicted RBP21.68■■□□□ 1.06
PDLIM2-221ENST00000622702 MED15Q96RN5 788 aa21.68■■□□□ 1.06
PDLIM2-221ENST00000622702 FTHL17Q9BXU8 183 aa21.68■■□□□ 1.06
PDLIM2-221ENST00000622702 A0A0B4J269 797 aa21.67■■□□□ 1.06
PDLIM2-221ENST00000622702 TRIM49BA6NDI0 452 aa21.67■■□□□ 1.06
PDLIM2-221ENST00000622702 CLDN3O15551 220 aa21.67■■□□□ 1.06
PDLIM2-221ENST00000622702 MYBPC2Q14324 1141 aa21.67■■□□□ 1.06
PDLIM2-221ENST00000622702 SLC27A1Q6PCB7 646 aa21.67■■□□□ 1.06
PDLIM2-221ENST00000622702 TMCO2Q7Z6W1 182 aaPredicted RBP21.67■■□□□ 1.06
PDLIM2-221ENST00000622702 SLC9A9Q8IVB4 645 aa21.67■■□□□ 1.06
PDLIM2-221ENST00000622702 BPIFA3Q9BQP9 254 aa21.67■■□□□ 1.06
PDLIM2-221ENST00000622702 TRAIPQ9BWF2 469 aa21.67■■□□□ 1.06
PDLIM2-221ENST00000622702 ANKFY1Q9P2R3 1169 aa21.67■■□□□ 1.06
PDLIM2-221ENST00000622702 GBF1Q92538 1859 aa21.67■■□□□ 1.06
PDLIM2-221ENST00000622702 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 KIAA0391O15091 583 aaKnown RBP21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 AMHP03971 560 aa21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 ZSCAN20P17040 1043 aaPredicted RBP21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 PBX2P40425 430 aa21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 STX17P56962 302 aa21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 ZNF568Q3ZCX4 644 aa21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 ARMCX5Q6P1M9 558 aa21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 APBB1IPQ7Z5R6 666 aaPredicted RBP21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 CDR2LQ86X02 465 aaPredicted RBP21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 HERC6Q8IVU3 1022 aa21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 POMGNT1Q8WZA1 660 aa21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 ADPGKQ9BRR6 497 aa21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 CBWD1Q9BRT8 395 aa21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 TCHPQ9BT92 498 aa21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 HAPLN2Q9GZV7 340 aa21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 CDT1Q9H211 546 aa21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 TSPY26PQ9H489 355 aa21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 DMAC2Q9NW81 257 aa21.66■■□□□ 1.06
PDLIM2-221ENST00000622702 ENPP3O14638 875 aa21.65■■□□□ 1.06
PDLIM2-221ENST00000622702 CLIC2O15247 247 aa21.65■■□□□ 1.06
PDLIM2-221ENST00000622702 NR3C1P04150 777 aa21.65■■□□□ 1.06
PDLIM2-221ENST00000622702 MCF2P10911 925 aa21.65■■□□□ 1.06
PDLIM2-221ENST00000622702 ZNF165P49910 485 aa21.65■■□□□ 1.06
PDLIM2-221ENST00000622702 RABGGTBP53611 331 aa21.65■■□□□ 1.06
PDLIM2-221ENST00000622702 NOLC1Q14978 699 aaKnown RBP eCLIP21.65■■□□□ 1.06
PDLIM2-221ENST00000622702 DCAF4L1Q3SXM0 396 aa21.65■■□□□ 1.06
PDLIM2-221ENST00000622702 UBXN11Q5T124 520 aa21.65■■□□□ 1.06
PDLIM2-221ENST00000622702 TWF2Q6IBS0 349 aaKnown RBP21.65■■□□□ 1.06
PDLIM2-221ENST00000622702 ZC3H3Q8IXZ2 948 aaKnown RBP21.65■■□□□ 1.06
PDLIM2-221ENST00000622702 ENOX1Q8TC92 643 aaKnown RBP21.65■■□□□ 1.06
PDLIM2-221ENST00000622702 DUSP9Q99956 384 aaKnown RBP21.65■■□□□ 1.06
PDLIM2-221ENST00000622702 PBX4Q9BYU1 374 aa21.65■■□□□ 1.06
PDLIM2-221ENST00000622702 MGEA5O60502 916 aa21.64■■□□□ 1.06
PDLIM2-221ENST00000622702 RPL13P26373 211 aaKnown RBP21.64■■□□□ 1.06
PDLIM2-221ENST00000622702 FKBP3Q00688 224 aaKnown RBP21.64■■□□□ 1.06
PDLIM2-221ENST00000622702 FAM117BQ6P1L5 589 aa21.64■■□□□ 1.06
PDLIM2-221ENST00000622702 RTN4RL1Q86UN2 441 aaPredicted RBP21.64■■□□□ 1.06
PDLIM2-221ENST00000622702 LINC01599Q8WXQ3 324 aa21.64■■□□□ 1.06
PDLIM2-221ENST00000622702 ADAM2Q99965 735 aa21.64■■□□□ 1.06
PDLIM2-221ENST00000622702 MSTO1Q9BUK6 570 aa21.64■■□□□ 1.06
PDLIM2-221ENST00000622702 TSPYL2Q9H2G4 693 aaPredicted RBP21.64■■□□□ 1.06
PDLIM2-221ENST00000622702 HSPBP1Q9NZL4 362 aa21.64■■□□□ 1.06
PDLIM2-221ENST00000622702 FAM189A1O60320 539 aa21.64■■□□□ 1.05
PDLIM2-221ENST00000622702 NR2F2P24468 414 aa21.64■■□□□ 1.05
PDLIM2-221ENST00000622702 DNAJB2P25686 324 aa21.64■■□□□ 1.05
PDLIM2-221ENST00000622702 MATR3P43243 847 aaKnown RBP eCLIP21.64■■□□□ 1.05
PDLIM2-221ENST00000622702 LRRC55Q6ZSA7 311 aa21.64■■□□□ 1.05
PDLIM2-221ENST00000622702 ZBTB33Q86T24 672 aa21.64■■□□□ 1.05
PDLIM2-221ENST00000622702 ZBED2Q9BTP6 218 aa21.64■■□□□ 1.05
PDLIM2-221ENST00000622702 EIF2AQ9BY44 585 aaKnown RBP21.64■■□□□ 1.05
PDLIM2-221ENST00000622702 RGS18Q9NS28 235 aa21.64■■□□□ 1.05
PDLIM2-221ENST00000622702 MSRAQ9UJ68 235 aa21.64■■□□□ 1.05
PDLIM2-221ENST00000622702 AGO2Q9UKV8 859 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms