RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 PLIN2Q99541 437 aa23.29■■□□□ 1.32
PMPCA-212ENST00000622209 ZBP1Q9H171 429 aa23.29■■□□□ 1.32
PMPCA-212ENST00000622209 TSHZ2Q9NRE2 1034 aa23.29■■□□□ 1.32
PMPCA-212ENST00000622209 TXLNAP40222 546 aa23.28■■□□□ 1.32
PMPCA-212ENST00000622209 AFF1P51825 1210 aaKnown RBP23.28■■□□□ 1.32
PMPCA-212ENST00000622209 PTENP60484 403 aa23.28■■□□□ 1.32
PMPCA-212ENST00000622209 DNM1Q05193 864 aaKnown RBP23.28■■□□□ 1.32
PMPCA-212ENST00000622209 PCBP1Q15365 356 aaKnown RBP eCLIP23.28■■□□□ 1.32
PMPCA-212ENST00000622209 SPECC1Q5M775 1068 aa23.28■■□□□ 1.32
PMPCA-212ENST00000622209 UBXN11Q5T124 520 aa23.28■■□□□ 1.32
PMPCA-212ENST00000622209 MRPL10Q7Z7H8 261 aaKnown RBP23.28■■□□□ 1.32
PMPCA-212ENST00000622209 DDX53Q86TM3 631 aaKnown RBP23.28■■□□□ 1.32
PMPCA-212ENST00000622209 IFNLR1Q8IU57 520 aaPredicted RBP23.28■■□□□ 1.32
PMPCA-212ENST00000622209 C12orf76Q8N812 135 aaPredicted RBP23.28■■□□□ 1.32
PMPCA-212ENST00000622209 RASSF8Q8NHQ8 419 aa23.28■■□□□ 1.32
PMPCA-212ENST00000622209 URGCPQ8TCY9 931 aa23.28■■□□□ 1.32
PMPCA-212ENST00000622209 KCNG4Q8TDN1 519 aa23.28■■□□□ 1.32
PMPCA-212ENST00000622209 RSPH1Q8WYR4 309 aa23.28■■□□□ 1.32
PMPCA-212ENST00000622209 KIFAP3Q92845 792 aa23.28■■□□□ 1.32
PMPCA-212ENST00000622209 PBXIP1Q96AQ6 731 aa23.28■■□□□ 1.32
PMPCA-212ENST00000622209 TIPINQ9BVW5 301 aa23.28■■□□□ 1.32
PMPCA-212ENST00000622209 NFKBIZQ9BYH8 718 aa23.28■■□□□ 1.32
PMPCA-212ENST00000622209 GPRC5CQ9NQ84 441 aa23.28■■□□□ 1.32
PMPCA-212ENST00000622209 CCDC39Q9UFE4 941 aa23.28■■□□□ 1.32
PMPCA-212ENST00000622209 B4GALT3O60512 393 aa23.27■■□□□ 1.32
PMPCA-212ENST00000622209 PLA2G4BP0C869 781 aa23.27■■□□□ 1.32
PMPCA-212ENST00000622209 NUCB2P80303 420 aa23.27■■□□□ 1.32
PMPCA-212ENST00000622209 CAPSQ13938 189 aa23.27■■□□□ 1.32
PMPCA-212ENST00000622209 KARSQ15046 597 aaKnown RBP23.27■■□□□ 1.32
PMPCA-212ENST00000622209 CES5AQ6NT32 575 aa23.27■■□□□ 1.32
PMPCA-212ENST00000622209 RINT1Q6NUQ1 792 aa23.27■■□□□ 1.32
PMPCA-212ENST00000622209 KANK3Q6NY19 840 aa23.27■■□□□ 1.32
PMPCA-212ENST00000622209 C1orf186Q6ZWK4 172 aa23.27■■□□□ 1.32
PMPCA-212ENST00000622209 USP49Q70CQ1 688 aa23.27■■□□□ 1.32
PMPCA-212ENST00000622209 KCND2Q9NZV8 630 aa23.27■■□□□ 1.32
PMPCA-212ENST00000622209 DDHD2O94830 711 aa23.26■■□□□ 1.31
PMPCA-212ENST00000622209 WEE2P0C1S8 567 aa23.26■■□□□ 1.31
PMPCA-212ENST00000622209 CTSAP10619 480 aa23.26■■□□□ 1.31
PMPCA-212ENST00000622209 PLCG1P19174 1290 aa23.26■■□□□ 1.31
PMPCA-212ENST00000622209 SLC12A3P55017 1021 aa23.26■■□□□ 1.31
PMPCA-212ENST00000622209 ALYREFQ86V81 257 aaKnown RBP23.26■■□□□ 1.31
PMPCA-212ENST00000622209 ADAM7Q9H2U9 754 aa23.26■■□□□ 1.31
PMPCA-212ENST00000622209 RSAD1Q9HA92 442 aa23.26■■□□□ 1.31
PMPCA-212ENST00000622209 RCOR1Q9UKL0 485 aa23.26■■□□□ 1.31
PMPCA-212ENST00000622209 WDFY4Q6ZS81 3184 aa23.25■■□□□ 1.31
PMPCA-212ENST00000622209 CUTAO60888 179 aa23.25■■□□□ 1.31
PMPCA-212ENST00000622209 POMCP01189 267 aa23.25■■□□□ 1.31
PMPCA-212ENST00000622209 SSBP05455 408 aaKnown RBP eCLIP23.25■■□□□ 1.31
PMPCA-212ENST00000622209 EPCAMP16422 314 aa23.25■■□□□ 1.31
PMPCA-212ENST00000622209 GUCY2CP25092 1073 aa23.25■■□□□ 1.31
PMPCA-212ENST00000622209 DDIT3P35638 169 aa23.25■■□□□ 1.31
PMPCA-212ENST00000622209 PPP2R5AQ15172 486 aa23.25■■□□□ 1.31
PMPCA-212ENST00000622209 RARS2Q5T160 578 aaKnown RBP23.25■■□□□ 1.31
PMPCA-212ENST00000622209 BMP8AQ7Z5Y6 402 aa23.25■■□□□ 1.31
PMPCA-212ENST00000622209 ZBTB33Q86T24 672 aa23.25■■□□□ 1.31
PMPCA-212ENST00000622209 IFT74Q96LB3 600 aa23.25■■□□□ 1.31
PMPCA-212ENST00000622209 FAM193BQ96PV7 902 aaPredicted RBP23.25■■□□□ 1.31
PMPCA-212ENST00000622209 RUSC1Q9BVN2 902 aa23.25■■□□□ 1.31
PMPCA-212ENST00000622209 VN1R3Q9BXE9 311 aa23.25■■□□□ 1.31
PMPCA-212ENST00000622209 BLOC1S4Q9NUP1 217 aa23.25■■□□□ 1.31
PMPCA-212ENST00000622209 CARNS1A5YM72 827 aa23.24■■□□□ 1.31
PMPCA-212ENST00000622209 ERLIN2O94905 339 aa23.24■■□□□ 1.31
PMPCA-212ENST00000622209 ALDH2P05091 517 aa23.24■■□□□ 1.31
PMPCA-212ENST00000622209 NAMPTP43490 491 aa23.24■■□□□ 1.31
PMPCA-212ENST00000622209 NHLH1Q02575 133 aa23.24■■□□□ 1.31
PMPCA-212ENST00000622209 ITIH3Q06033 890 aa23.24■■□□□ 1.31
PMPCA-212ENST00000622209 PTPN21Q16825 1174 aa23.24■■□□□ 1.31
PMPCA-212ENST00000622209 RRAGBQ5VZM2 374 aa23.24■■□□□ 1.31
PMPCA-212ENST00000622209 RAD54LQ92698 747 aa23.24■■□□□ 1.31
PMPCA-212ENST00000622209 DRC1Q96MC2 740 aa23.24■■□□□ 1.31
PMPCA-212ENST00000622209 KCNH6Q9H252 994 aa23.24■■□□□ 1.31
PMPCA-212ENST00000622209 POMKQ9H5K3 350 aa23.24■■□□□ 1.31
PMPCA-212ENST00000622209 STK17AQ9UEE5 414 aa23.24■■□□□ 1.31
PMPCA-212ENST00000622209 LRRIQ4A6NIV6 560 aa23.23■■□□□ 1.31
PMPCA-212ENST00000622209 ITGA4P13612 1032 aa23.23■■□□□ 1.31
PMPCA-212ENST00000622209 NCLP19338 710 aaKnown RBP23.23■■□□□ 1.31
PMPCA-212ENST00000622209 ANP32AP39687 249 aaKnown RBP23.23■■□□□ 1.31
PMPCA-212ENST00000622209 KRT85P78386 507 aa23.23■■□□□ 1.31
PMPCA-212ENST00000622209 SIGLEC14Q08ET2 396 aa23.23■■□□□ 1.31
PMPCA-212ENST00000622209 NCBP1Q09161 790 aaKnown RBP23.23■■□□□ 1.31
PMPCA-212ENST00000622209 CDCA2Q69YH5 1023 aaPredicted RBP23.23■■□□□ 1.31
PMPCA-212ENST00000622209 SMG8Q8ND04 991 aaKnown RBP23.23■■□□□ 1.31
PMPCA-212ENST00000622209 SLC22A17Q8WUG5 538 aa23.23■■□□□ 1.31
PMPCA-212ENST00000622209 CPB2Q96IY4 423 aa23.23■■□□□ 1.31
PMPCA-212ENST00000622209 EIF2AQ9BY44 585 aaKnown RBP23.23■■□□□ 1.31
PMPCA-212ENST00000622209 C2orf40Q9H1Z8 148 aa23.23■■□□□ 1.31
PMPCA-212ENST00000622209 RNF39Q9H2S5 420 aa23.23■■□□□ 1.31
PMPCA-212ENST00000622209 C17orf75Q9HAS0 396 aa23.23■■□□□ 1.31
PMPCA-212ENST00000622209 KANSL3Q9P2N6 904 aa23.23■■□□□ 1.31
PMPCA-212ENST00000622209 FAN1Q9Y2M0 1017 aa23.23■■□□□ 1.31
PMPCA-212ENST00000622209 NR2E1Q9Y466 385 aa23.23■■□□□ 1.31
PMPCA-212ENST00000622209 IRAK3Q9Y616 596 aa23.23■■□□□ 1.31
PMPCA-212ENST00000622209 CNTNAP2Q9UHC6 1331 aa23.23■■□□□ 1.31
PMPCA-212ENST00000622209 TECTAO75443 2155 aa23.23■■□□□ 1.31
PMPCA-212ENST00000622209 INO80B-WBP1J3KQ70 363 aa23.22■■□□□ 1.31
PMPCA-212ENST00000622209 TSPAN1O60635 241 aa23.22■■□□□ 1.31
PMPCA-212ENST00000622209 HIP1RO75146 1068 aa23.22■■□□□ 1.31
PMPCA-212ENST00000622209 AXLP30530 894 aa23.22■■□□□ 1.31
PMPCA-212ENST00000622209 ME1P48163 572 aa23.22■■□□□ 1.31
PMPCA-212ENST00000622209 MBTD1Q05BQ5 628 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms