RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 TRADDQ15628 312 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 LETM2Q2VYF4 491 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 SLC10A5Q5PT55 438 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 PHLDB3Q6NSJ2 640 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 MAPKAPK5Q8IW41 473 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 SYT2Q8N9I0 419 aaPredicted RBP8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 SCAIQ8N9R8 606 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 FNDC8Q8TC99 324 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 NEK9Q8TD19 979 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 SREK1Q8WXA9 508 aaKnown RBP8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 FGFR1OP2Q9NVK5 253 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 TMEM260Q9NX78 707 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 ARHGEF38Q9NXL2 777 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 LNPEPQ9UIQ6 1025 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 GGT7Q9UJ14 662 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 PLAGL2Q9UPG8 496 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 USH1CQ9Y6N9 552 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 POTEFA5A3E0 1075 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 EIF3FO00303 357 aaPredicted RBP8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 CCNT1O60563 726 aaKnown RBP8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 CBFA2T3O75081 653 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 POTEIP0CG38 1075 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 TSPY3P0CV98 308 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 TSPY8P0CW00 308 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 PYGMP11217 842 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 ETS2P15036 469 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 MARK3P27448 753 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 TM4SF1P30408 202 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 HALP42357 657 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 MAGEA1P43355 309 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 CCT8P50990 548 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 PPARDQ03181 441 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 ZC2HC1CQ53FD0 456 aaPredicted RBP8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 TNFAIP8L3Q5GJ75 292 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 MEI1Q5TIA1 1274 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 DENND2CQ68D51 928 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 NEPROQ6NW34 567 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 POTEEQ6S8J3 1075 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 B3GNT6Q6ZMB0 384 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 HS2ST1Q7LGA3 356 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 DAAM2Q86T65 1068 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 SAPCD2Q86UD0 394 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 ZSCAN29Q8IWY8 852 aaPredicted RBP8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 PEX5LQ8IYB4 626 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 NUP93Q8N1F7 819 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 ANKLE1Q8NAG6 615 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 GLIS3Q8NEA6 775 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 TTC8Q8TAM2 541 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 SCFD2Q8WU76 684 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 TGFBRAP1Q8WUH2 860 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 NOC4LQ9BVI4 516 aaKnown RBP8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 MTFR1LQ9H019 292 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 DENND2DQ9H6A0 471 aaPredicted RBP8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 ARHGAP20Q9P2F6 1191 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 STX18Q9P2W9 335 aaKnown RBP8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 STX8Q9UNK0 236 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 SIK3Q9Y2K2 1263 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 FRMD4BQ9Y2L6 1034 aa8.01□□□□□ -1.13
TRIM49B-202ENST00000622138 KIF13BQ9NQT8 1826 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 TCP11X1B4DZS4 312 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 KLRF2D3W0D1 207 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 MATN2O00339 956 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 EDIL3O43854 480 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 AKR1B10O60218 316 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 UBTFL6P0CB48 400 aaPredicted RBP8□□□□□ -1.13
TRIM49B-202ENST00000622138 TECP42680 631 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 TXKP42681 527 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 POLGP54098 1239 aaPredicted RBP8□□□□□ -1.13
TRIM49B-202ENST00000622138 YARSP54577 528 aaKnown RBP8□□□□□ -1.13
TRIM49B-202ENST00000622138 EMP3P54852 163 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 NAPAP54920 295 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 GRB10Q13322 594 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 TTLL12Q14166 644 aaPredicted RBP8□□□□□ -1.13
TRIM49B-202ENST00000622138 RCN1Q15293 331 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 LARP7Q4G0J3 582 aaKnown RBP eCLIP8□□□□□ -1.13
TRIM49B-202ENST00000622138 USP17L2Q6R6M4 530 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 GET4Q7L5D6 327 aaPredicted RBP8□□□□□ -1.13
TRIM49B-202ENST00000622138 VSIG1Q86XK7 387 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 CROCCP3Q8IVE0 287 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 KLHL7Q8IXQ5 586 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 RIBC1Q8N443 379 aaPredicted RBP8□□□□□ -1.13
TRIM49B-202ENST00000622138 SERBP1Q8NC51 408 aaKnown RBP eCLIP8□□□□□ -1.13
TRIM49B-202ENST00000622138 ACTRT1Q8TDG2 376 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 TAF4BQ92750 862 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 CASP10Q92851 521 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 MTMR8Q96EF0 704 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 TRIM11Q96F44 468 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 PCMTD1Q96MG8 357 aaPredicted RBP8□□□□□ -1.13
TRIM49B-202ENST00000622138 NLRP3Q96P20 1036 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 PNMA5Q96PV4 448 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 ERGIC2Q96RQ1 377 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 FMO2Q99518 471 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 C7orf25Q9BPX7 421 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 TBC1D10AQ9BXI6 508 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 ZMYND12Q9H0C1 365 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 MKNK2Q9HBH9 465 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 BLOC1S4Q9NUP1 217 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 CNOT7Q9UIV1 285 aaKnown RBP8□□□□□ -1.13
TRIM49B-202ENST00000622138 TTLL3Q9Y4R7 772 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms