RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 ZBTB41Q5SVQ8 909 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 ZBTB33Q86T24 672 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 RSPH3Q86UC2 560 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 CDR2LQ86X02 465 aaPredicted RBP11.61□□□□□ -0.55
CPNE3-212ENST00000621783 ZNF710Q8N1W2 664 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 CCDC155Q8N6L0 562 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 SLC43A3Q8NBI5 491 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 TMEM40Q8WWA1 233 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 ARMC5Q96C12 935 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 CPB2Q96IY4 423 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 FAM213AQ9BRX8 229 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 CDT1Q9H211 546 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 PDZD7Q9H5P4 517 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 KIAA1586Q9HCI6 787 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 PTPRHQ9HD43 1115 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 TRMT13Q9NUP7 481 aaKnown RBP11.61□□□□□ -0.55
CPNE3-212ENST00000621783 SIK3Q9Y2K2 1263 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 CDY2AQ9Y6F7 541 aa11.61□□□□□ -0.55
CPNE3-212ENST00000621783 M0QZ92 97 aa11.6□□□□□ -0.55
CPNE3-212ENST00000621783 OGTO15294 1046 aa11.6□□□□□ -0.55
CPNE3-212ENST00000621783 FAM189A1O60320 539 aa11.6□□□□□ -0.55
CPNE3-212ENST00000621783 LDHAP00338 332 aaKnown RBP11.6□□□□□ -0.55
CPNE3-212ENST00000621783 RPLP2P05387 115 aaKnown RBP11.6□□□□□ -0.55
CPNE3-212ENST00000621783 CTSHP09668 335 aa11.6□□□□□ -0.55
CPNE3-212ENST00000621783 SFPQP23246 707 aaKnown RBP eCLIP11.6□□□□□ -0.55
CPNE3-212ENST00000621783 EIF4BP23588 611 aaKnown RBP11.6□□□□□ -0.55
CPNE3-212ENST00000621783 ACOT2P49753 483 aa11.6□□□□□ -0.55
CPNE3-212ENST00000621783 KLK7P49862 253 aa11.6□□□□□ -0.55
CPNE3-212ENST00000621783 DLG4P78352 724 aa11.6□□□□□ -0.55
CPNE3-212ENST00000621783 MGAT3Q09327 533 aa11.6□□□□□ -0.55
CPNE3-212ENST00000621783 PTK7Q13308 1070 aa11.6□□□□□ -0.55
CPNE3-212ENST00000621783 HSP90AA2PQ14568 343 aaPredicted RBP11.6□□□□□ -0.55
CPNE3-212ENST00000621783 CRELD2Q6UXH1 353 aaPredicted RBP11.6□□□□□ -0.55
CPNE3-212ENST00000621783 CATSPER4Q7RTX7 472 aa11.6□□□□□ -0.55
CPNE3-212ENST00000621783 CCDC186Q7Z3E2 898 aa11.6□□□□□ -0.55
CPNE3-212ENST00000621783 RPAINQ86UA6 219 aa11.6□□□□□ -0.55
CPNE3-212ENST00000621783 DHX38Q92620 1227 aaKnown RBP11.6□□□□□ -0.55
CPNE3-212ENST00000621783 MFSD14AQ96MC6 490 aa11.6□□□□□ -0.55
CPNE3-212ENST00000621783 TCHPQ9BT92 498 aa11.6□□□□□ -0.55
CPNE3-212ENST00000621783 CELF4Q9BZC1 486 aaKnown RBP11.6□□□□□ -0.55
CPNE3-212ENST00000621783 NOD1Q9Y239 953 aa11.6□□□□□ -0.55
CPNE3-212ENST00000621783 ZNF233A6NK53 670 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 LRRIQ3A6PVS8 624 aaPredicted RBP11.59□□□□□ -0.55
CPNE3-212ENST00000621783 ARVCFO00192 962 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 B4GALT4O60513 344 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 GYPCP04921 128 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 FMO5P49326 533 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 WNT7BP56706 349 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 GSDMDP57764 484 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 MCCD1P59942 119 aaPredicted RBP11.59□□□□□ -0.55
CPNE3-212ENST00000621783 MYL7Q01449 175 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 ENPEPQ07075 957 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 KCNMA1Q12791 1236 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 TRIM14Q14142 442 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 ARID5BQ14865 1188 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 PSMD6Q15008 389 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 PCBP1Q15365 356 aaKnown RBP eCLIP11.59□□□□□ -0.55
CPNE3-212ENST00000621783 PKN2Q16513 984 aaKnown RBP11.59□□□□□ -0.55
CPNE3-212ENST00000621783 TRIM71Q2Q1W2 868 aaKnown RBP11.59□□□□□ -0.55
CPNE3-212ENST00000621783 SEZ6Q53EL9 994 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 C1orf220Q5T0J3 134 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 BRSK2Q8IWQ3 736 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 CCDC150Q8NCX0 1101 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 TMC2Q8TDI7 906 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 PCMTD1Q96MG8 357 aaPredicted RBP11.59□□□□□ -0.55
CPNE3-212ENST00000621783 LSM14BQ9BX40 385 aaKnown RBP11.59□□□□□ -0.55
CPNE3-212ENST00000621783 SENP6Q9GZR1 1112 aaPredicted RBP11.59□□□□□ -0.55
CPNE3-212ENST00000621783 CRISPLD2Q9H0B8 497 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 MMRN2Q9H8L6 949 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 TOPORSQ9NS56 1045 aaPredicted RBP11.59□□□□□ -0.55
CPNE3-212ENST00000621783 AGPAT5Q9NUQ2 364 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 RBAKQ9NYW8 714 aaPredicted RBP11.59□□□□□ -0.55
CPNE3-212ENST00000621783 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.59□□□□□ -0.55
CPNE3-212ENST00000621783 HTTP42858 3142 aa11.59□□□□□ -0.55
CPNE3-212ENST00000621783 RALGAPA2Q2PPJ7 1873 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 GTPBP10A4D1E9 387 aaKnown RBP11.58□□□□□ -0.56
CPNE3-212ENST00000621783 N4BP1O75113 896 aaKnown RBP11.58□□□□□ -0.56
CPNE3-212ENST00000621783 CHRNA1P02708 482 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 MCF2P10911 925 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 THPOP40225 353 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 TNFSF9P41273 254 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 PPP3CAQ08209 521 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 RBL2Q08999 1139 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 GOLGA8FQ08AF8 430 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 GOLGA8DPQ0D2H9 430 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 CBWD6Q4V339 395 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 CBWD3Q5JTY5 395 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 CBWD5Q5RIA9 395 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 FAM228AQ86W67 206 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 PPFIBP1Q86W92 1011 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 CEP120Q8N960 986 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 PARD3BQ8TEW8 1205 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 U2AF1L4Q8WU68 220 aaKnown RBP11.58□□□□□ -0.56
CPNE3-212ENST00000621783 CCDC127Q96BQ5 260 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 TRIM44Q96DX7 344 aaPredicted RBP11.58□□□□□ -0.56
CPNE3-212ENST00000621783 TTYH3Q9C0H2 523 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 TRPV6Q9H1D0 765 aa11.58□□□□□ -0.56
CPNE3-212ENST00000621783 CPSF3Q9UKF6 684 aaKnown RBP11.58□□□□□ -0.56
CPNE3-212ENST00000621783 NOC2LQ9Y3T9 749 aaKnown RBP11.58□□□□□ -0.56
CPNE3-212ENST00000621783 A0A1B0GUA9 196 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms