RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 OPHN1O60890 802 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 DKK1O94907 266 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 SSBP05455 408 aaKnown RBP eCLIP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 PARP1P09874 1014 aaKnown RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 CD59P13987 128 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 TRIM27P14373 513 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 ITGB5P18084 799 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 IBSPP21815 317 aaPredicted RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 SMARCA1P28370 1054 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 WEE1P30291 646 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 GDI1P31150 447 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 EIF2S3P41091 472 aaKnown RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 NTHL1P78549 312 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 AMPD2Q01433 879 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 RHDQ02161 417 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 CTDSPL2Q05D32 466 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 CYP4F3Q08477 520 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 DSC1Q08554 894 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 FCHO2Q0JRZ9 810 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 CAMK2BQ13554 666 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 RAB33AQ14088 237 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 MAPK6Q16659 721 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 FBXO43Q4G163 708 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 PABPC1LQ4VXU2 614 aaKnown RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 PKDCCQ504Y2 493 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 FAM78AQ5JUQ0 283 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 LIN9Q5TKA1 542 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 PMS2CLQ68D20 193 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 PCSK4Q6UW60 755 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 ABHD15Q6UXT9 468 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 ZNF574Q6ZN55 896 aaPredicted RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 DBX2Q6ZNG2 339 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 SYT13Q7L8C5 426 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 RABEPKQ7Z6M1 372 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 SYT12Q8IV01 421 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 COLGALT2Q8IYK4 626 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 HDDC3Q8N4P3 179 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 LINC01465Q8N7H1 131 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 FAM181AQ8N9Y4 354 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 LEMD2Q8NC56 503 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 RNF169Q8NCN4 708 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 ST13P5Q8NFI4 369 aaPredicted RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 LNX1Q8TBB1 728 aaPredicted RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 MDM1Q8TC05 714 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 URGCPQ8TCY9 931 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 CSGALNACT1Q8TDX6 532 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 WHAMMQ8TF30 809 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 TRAPPC12Q8WVT3 735 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 SMARCD2Q92925 531 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 GPATCH3Q96I76 525 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 ZFP91Q96JP5 570 aaPredicted RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 ASB16Q96NS5 453 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 TMEM209Q96SK2 561 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 CLSTN3Q9BQT9 956 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 GCOM2Q9BZD3 368 aaPredicted RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 RIOX1Q9H6W3 641 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 JPH1Q9HDC5 661 aaPredicted RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 ECHDC1Q9NTX5 307 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 FAM105AQ9NUU6 356 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 DNAAF2Q9NVR5 837 aaKnown RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 C2orf42Q9NWW7 574 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 NXF1Q9UBU9 619 aaKnown RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 SLC9A2Q9UBY0 812 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 FBXW11Q9UKB1 542 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 TPCN1Q9ULQ1 816 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 MAFFQ9ULX9 164 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 SLC6A14Q9UN76 642 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 CEP131Q9UPN4 1083 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 EXOC6BQ9Y2D4 811 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 PCDHB9Q9Y5E1 797 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 MAFBQ9Y5Q3 323 aaPredicted RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 UBIAD1Q9Y5Z9 338 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 MCM3APO60318 1980 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 ACACAQ13085 2346 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 MYH1P12882 1939 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 ADAMTS20P59510 1910 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 PCNX2A6NKB5 2137 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 COL12A1Q99715 3063 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 ARHGEF37A1IGU5 675 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 PALM3A6NDB9 673 aaPredicted RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 ZBTB42B2RXF5 422 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 SPECC1L-ADORA2AF8WAN1 911 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 ARHGAP33O14559 1287 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 MEIS2O14770 477 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 DHX16O60231 1041 aaKnown RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 B4GALT3O60512 393 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 PPP1R11O60927 126 aaPredicted RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 CBFA2T3O75081 653 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 HMMRO75330 724 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 MAFO75444 373 aaPredicted RBP2.69□□□□□ -1.98
CPNE3-211ENST00000621526 TADA2AO75478 443 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 C22orf31O95567 290 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 APBB3O95704 486 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 FGAP02671 866 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 VTNP04004 478 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 C8AP07357 584 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 RHOP08100 348 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 SYPP08247 313 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 SERPINF2P08697 491 aa2.69□□□□□ -1.98
CPNE3-211ENST00000621526 FTH1P19P0C7X4 201 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms