RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 LIG4P49917 911 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 STAT5BP51692 787 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 WNT7BP56706 349 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 DRP2Q13474 957 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 EAPPQ56P03 285 aaPredicted RBP22.99■■□□□ 1.27
LIME1-210ENST00000621325 SV2AQ7L0J3 742 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 HDXQ7Z353 690 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 SLC7A3Q8WY07 619 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 L3MBTL3Q96JM7 780 aaPredicted RBP22.99■■□□□ 1.27
LIME1-210ENST00000621325 HAPLN2Q9GZV7 340 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 COQ4Q9Y3A0 265 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 KCNK3O14649 394 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 NEDD9Q14511 834 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 SMC1AQ14683 1233 aaKnown RBP22.99■■□□□ 1.27
LIME1-210ENST00000621325 IFI16Q16666 785 aaKnown RBP22.99■■□□□ 1.27
LIME1-210ENST00000621325 WDR78Q5VTH9 848 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 LMBRD2Q68DH5 695 aaPredicted RBP22.99■■□□□ 1.27
LIME1-210ENST00000621325 GPAT2Q6NUI2 795 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 SLC35G2Q8TBE7 412 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 ZBTB45Q96K62 511 aaPredicted RBP22.99■■□□□ 1.27
LIME1-210ENST00000621325 THAP2Q9H0W7 228 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 EDN1P05305 212 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 TMEM253P0C7T8 217 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 TARBP2Q15633 366 aaKnown RBP22.98■■□□□ 1.27
LIME1-210ENST00000621325 METTL7BQ6UX53 244 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 EP400NLQ6ZTU2 488 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 TRIM50Q86XT4 487 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 FMNL3Q8IVF7 1028 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 HELQQ8TDG4 1101 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 GDAP1L1Q96MZ0 367 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 PI4K2AQ9BTU6 479 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 CYP26A1O43174 497 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 SLC25A27O95847 323 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 CASP8Q14790 479 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 TMEM63BQ5T3F8 832 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 SLFN11Q7Z7L1 901 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 FAM71AQ8IYT1 594 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 RPUSD2Q8IZ73 545 aaKnown RBP22.98■■□□□ 1.27
LIME1-210ENST00000621325 FBXL13Q8NEE6 735 aa22.98■■□□□ 1.27
LIME1-210ENST00000621325 MARK3P27448 753 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 CYP2C19P33261 490 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 ACOT2P49753 483 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 GPC3P51654 580 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 NLRP11P59045 1033 aaKnown RBP22.97■■□□□ 1.27
LIME1-210ENST00000621325 PRPF4BQ13523 1007 aaKnown RBP22.97■■□□□ 1.27
LIME1-210ENST00000621325 HSDL1Q3SXM5 330 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 DAAM2Q86T65 1068 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 NOP9Q86U38 636 aaKnown RBP22.97■■□□□ 1.27
LIME1-210ENST00000621325 SLC47A2Q86VL8 602 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 DEPTORQ8TB45 409 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 ZC3H15Q8WU90 426 aaKnown RBP22.97■■□□□ 1.27
LIME1-210ENST00000621325 SEPT1Q8WYJ6 367 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 ZNF516Q92618 1163 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 TATDN2Q93075 761 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 PCDHB18PQ96TA0 734 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 RAB20Q9NX57 234 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 NCANO14594 1321 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 ZBTB48P10074 688 aaPredicted RBP22.97■■□□□ 1.27
LIME1-210ENST00000621325 TGFB3P10600 412 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 NAMPTP43490 491 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 STRN3Q13033 797 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 CCNI2Q6ZMN8 369 aaPredicted RBP22.97■■□□□ 1.27
LIME1-210ENST00000621325 EPS8L1Q8TE68 723 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 CTNNBL1Q8WYA6 563 aaPredicted RBP22.97■■□□□ 1.27
LIME1-210ENST00000621325 RFFLQ8WZ73 363 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 DHX38Q92620 1227 aaKnown RBP22.97■■□□□ 1.27
LIME1-210ENST00000621325 TAF4BQ92750 862 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 ZCCHC17Q9NP64 241 aaKnown RBP22.97■■□□□ 1.27
LIME1-210ENST00000621325 RNF14Q9UBS8 474 aa22.97■■□□□ 1.27
LIME1-210ENST00000621325 ZNF233A6NK53 670 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 H0YCG3 227 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 BUB1BO60566 1050 aaPredicted RBP22.96■■□□□ 1.27
LIME1-210ENST00000621325 CHRNB2P17787 502 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 ZBTB41Q5SVQ8 909 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 PEX26Q7Z412 305 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 FBXO16Q8IX29 292 aaPredicted RBP22.96■■□□□ 1.27
LIME1-210ENST00000621325 SHC3Q92529 594 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 MMP19Q99542 508 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 TARS2Q9BW92 718 aaKnown RBP22.96■■□□□ 1.27
LIME1-210ENST00000621325 NRBP2Q9NSY0 501 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 NOCTQ9UK39 431 aaKnown RBP22.96■■□□□ 1.27
LIME1-210ENST00000621325 COG5Q9UP83 839 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 STXBP5LQ9Y2K9 1186 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 LRRC37A2A6NM11 1700 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 DNAJC25-GNG10A0A024R161 153 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 H3BQF6 201 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 K7ERI5 159 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 KCTD2Q14681 263 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 PLEKHA4Q9H4M7 779 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 PDE11AQ9HCR9 933 aa22.96■■□□□ 1.27
LIME1-210ENST00000621325 POLR3GO15318 223 aaPredicted RBP22.95■■□□□ 1.26
LIME1-210ENST00000621325 EXTL3O43909 919 aa22.95■■□□□ 1.26
LIME1-210ENST00000621325 CYP2C8P10632 490 aa22.95■■□□□ 1.26
LIME1-210ENST00000621325 MCM3P25205 808 aa22.95■■□□□ 1.26
LIME1-210ENST00000621325 OAS2P29728 719 aaKnown RBP22.95■■□□□ 1.26
LIME1-210ENST00000621325 MFAP3P55082 362 aa22.95■■□□□ 1.26
LIME1-210ENST00000621325 CAPSQ13938 189 aa22.95■■□□□ 1.26
LIME1-210ENST00000621325 FAM160B1Q5W0V3 765 aa22.95■■□□□ 1.26
LIME1-210ENST00000621325 CCDC70Q6NSX1 233 aa22.95■■□□□ 1.26
LIME1-210ENST00000621325 NT5DC3Q86UY8 548 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms