RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 ANKRD13CQ8N6S4 541 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 C4orf32Q8N8J7 132 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 SLC7A6OSQ96CW6 309 aaPredicted RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 GPR101Q96P66 508 aaPredicted RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 METTL14Q9HCE5 456 aaKnown RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 CTDP1Q9Y5B0 961 aaPredicted RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 SPO11Q9Y5K1 396 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 FADS3Q9Y5Q0 445 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 BICDL2A1A5D9 508 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 CCDC162PA2VCL2 907 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 A6NJR5 290 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 MAP3K7O43318 606 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 DDAH1O94760 285 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 ZCCHC18P0CG32 403 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 PRDX5P30044 214 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 TM4SF1P30408 202 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 CA8P35219 290 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 DCTN2Q13561 401 aaKnown RBP11.08□□□□□ -0.64
VPS11-207ENST00000620429 SPDYAQ5MJ70 313 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 BTNL9Q6UXG8 535 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 TAOK1Q7L7X3 1001 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 FBXO33Q7Z6M2 555 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 ECHDC2Q86YB7 292 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 CYP4X1Q8N118 509 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 NEK9Q8TD19 979 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 RASGRP4Q8TDF6 673 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 GRAMD1AQ96CP6 724 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 CGREF1Q99674 301 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 DDX50Q9BQ39 737 aaKnown RBP11.08□□□□□ -0.64
VPS11-207ENST00000620429 TAOK3Q9H2K8 898 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 EPB41L4BQ9H329 900 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 ZNF212Q9UDV6 495 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 PYGMP11217 842 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 CDK4P11802 303 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 PDE4DQ08499 809 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 INAQ16352 499 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 KHDC1Q4VXA5 237 aaKnown RBP11.08□□□□□ -0.64
VPS11-207ENST00000620429 ZCWPW2Q504Y3 356 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 MIIPQ5JXC2 388 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 NEPROQ6NW34 567 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 SLC2A7Q6PXP3 512 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 C4orf50Q6ZRC1 276 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 TRIM50Q86XT4 487 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 FNDC8Q8TC99 324 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 GAB3Q8WWW8 586 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 ERGIC2Q96RQ1 377 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 FAM207AQ9NSI2 230 aaPredicted RBP11.08□□□□□ -0.64
VPS11-207ENST00000620429 BOLA2-SMG1P6H3BVE0 249 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 CCDC188H7C350 402 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 NKRFO15226 690 aaKnown RBP eCLIP11.08□□□□□ -0.64
VPS11-207ENST00000620429 DAPK3O43293 454 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 NMT2O60551 498 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 SERPINB7O75635 380 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 MARK3P27448 753 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 IFI35P80217 286 aaPredicted RBP11.08□□□□□ -0.64
VPS11-207ENST00000620429 MECOMQ03112 1051 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 PFKFB3Q16875 520 aaPredicted RBP11.08□□□□□ -0.64
VPS11-207ENST00000620429 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.08□□□□□ -0.64
VPS11-207ENST00000620429 CCDC174Q6PII3 467 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 TPTE2Q6XPS3 522 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 BLIDQ8IZY5 108 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 ACTRT1Q8TDG2 376 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 NYXQ9GZU5 481 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 TMEM60Q9H2L4 133 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 PABPC3Q9H361 631 aaKnown RBP11.08□□□□□ -0.64
VPS11-207ENST00000620429 AZI2Q9H6S1 392 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 KBTBD4Q9NVX7 518 aa11.08□□□□□ -0.64
VPS11-207ENST00000620429 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.08□□□□□ -0.64
VPS11-207ENST00000620429 STX18Q9P2W9 335 aaKnown RBP11.08□□□□□ -0.64
VPS11-207ENST00000620429 UMODL1Q5DID0 1318 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 FAM205AQ6ZU69 1335 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 NDUFB5O43674 189 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 CALML3P27482 149 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 EPHB2P29323 1055 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 DNA2P51530 1060 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 GALK1P51570 392 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 ARPC4P59998 168 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 KRT72Q14CN4 511 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 RCN1Q15293 331 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 CCDC153Q494R4 210 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 INTS8Q75QN2 995 aaKnown RBP11.07□□□□□ -0.64
VPS11-207ENST00000620429 HS2ST1Q7LGA3 356 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 DGCR14Q96DF8 476 aaKnown RBP11.07□□□□□ -0.64
VPS11-207ENST00000620429 MYLK2Q9H1R3 596 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 SLITRK6Q9H5Y7 841 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 MMRN2Q9H8L6 949 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 CNOT7Q9UIV1 285 aaKnown RBP11.07□□□□□ -0.64
VPS11-207ENST00000620429 ZNF711Q9Y462 761 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 BAZ2AQ9UIF9 1905 aaKnown RBP11.07□□□□□ -0.64
VPS11-207ENST00000620429 C10orf71Q711Q0 1435 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 KIAA1551Q9HCM1 1747 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 SCN7AQ01118 1682 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 CCDC194A0A1B0GVG4 234 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 EPHB6O15197 1021 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 BUB1O43683 1085 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 PALMO75781 387 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 CYP2D6P10635 497 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 HIBADHP31937 336 aaKnown RBP11.07□□□□□ -0.64
VPS11-207ENST00000620429 RFC4P35249 363 aa11.07□□□□□ -0.64
VPS11-207ENST00000620429 CLCN2P51788 898 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms