RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 OLIG1Q8TAK6 271 aa20.88■□□□□ 0.93
LAPTM4B-204ENST00000619747 CDHR1Q96JP9 859 aa20.88■□□□□ 0.93
LAPTM4B-204ENST00000619747 MYH9P35579 1960 aaKnown RBP20.88■□□□□ 0.93
LAPTM4B-204ENST00000619747 DGAT1O75907 488 aa20.88■□□□□ 0.93
LAPTM4B-204ENST00000619747 CALCAP01258 141 aa20.88■□□□□ 0.93
LAPTM4B-204ENST00000619747 CFAP221Q4G0U5 840 aa20.88■□□□□ 0.93
LAPTM4B-204ENST00000619747 KIFAP3Q92845 792 aa20.88■□□□□ 0.93
LAPTM4B-204ENST00000619747 PI4K2AQ9BTU6 479 aa20.88■□□□□ 0.93
LAPTM4B-204ENST00000619747 IGSF9BQ9UPX0 1349 aa20.88■□□□□ 0.93
LAPTM4B-204ENST00000619747 ZSCAN5CA6NGD5 496 aaPredicted RBP20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 SUPT20HL2P0C7V6 817 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 ALDH5A1P51649 535 aaPredicted RBP20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 RPS6KA1Q15418 735 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 PREPLQ4J6C6 727 aaPredicted RBP20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 SH3D19Q5HYK7 790 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 RDM1Q8NG50 284 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 TPCN2Q8NHX9 752 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 SENP7Q9BQF6 1050 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 TRIM6Q9C030 488 aaPredicted RBP20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 SPATC1LQ9H0A9 340 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 ZNF302Q9NR11 478 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 EXOC7Q9UPT5 735 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 LOXHD1Q8IVV2 1947 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 ESYT3A0FGR9 886 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 AARSP49588 968 aaKnown RBP eCLIP20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 LY6KQ17RY6 165 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 PARD3BQ8TEW8 1205 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 UPF1Q92900 1129 aaKnown RBP eCLIP20.87■□□□□ 0.934e-10■■■■□ 19.7
LAPTM4B-204ENST00000619747 IWS1Q96ST2 819 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 ST6GALNAC4Q9H4F1 302 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 ATP6V0A4Q9HBG4 840 aa20.87■□□□□ 0.93
LAPTM4B-204ENST00000619747 SOWAHBA6NEL2 793 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 LRRIQ4A6NIV6 560 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 MARK3P27448 753 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 GGCXP38435 758 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 CCNHP51946 323 aaPredicted RBP20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 MYBPC2Q14324 1141 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 EPC2Q52LR7 807 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 TAS1R3Q7RTX0 852 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 SLC30A5Q8TAD4 765 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 FAM76AQ8TAV0 307 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 SLC35G2Q8TBE7 412 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 TAS1R2Q8TE23 839 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 ARHGEF26Q96DR7 871 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 IFT74Q96LB3 600 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 THAP2Q9H0W7 228 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 TXNRD2Q9NNW7 524 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 WDR81Q562E7 1941 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 KLHL33A6NCF5 533 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 CEP104O60308 925 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 SKAP2O75563 359 aaPredicted RBP20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 UBA1P22314 1058 aaKnown RBP20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 ACOT2P49753 483 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 C10orf76Q5T2E6 689 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 PEX26Q7Z412 305 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 TAF4BQ92750 862 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 ZBTB45Q96K62 511 aaPredicted RBP20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 TIPINQ9BVW5 301 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 ASCC2Q9H1I8 757 aaPredicted RBP20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 CENPHQ9H3R5 247 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 SPON1Q9HCB6 807 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 HPCAL4Q9UM19 191 aa20.86■□□□□ 0.93
LAPTM4B-204ENST00000619747 CYP26A1O43174 497 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 CLSTN1O94985 981 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 SGPL1O95470 568 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 EMC2Q15006 297 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 Q3C1V9 767 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 SEZ6Q53EL9 994 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 XKR3Q5GH77 459 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 C9orf131Q5VYM1 1079 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 CCDC70Q6NSX1 233 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 FMNL3Q8IVF7 1028 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 KLHL7Q8IXQ5 586 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 C12orf56Q8IXR9 622 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 CHST13Q8NET6 341 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 DHX38Q92620 1227 aaKnown RBP20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 ZNF668Q96K58 619 aaPredicted RBP20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 SYNGAP1Q96PV0 1343 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 HARSP12081 509 aaKnown RBP20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 C8orf74Q6P047 294 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 CCNI2Q6ZMN8 369 aaPredicted RBP20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 OTUD6BQ8N6M0 293 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 LRRC57Q8N9N7 239 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 MCPH1Q8NEM0 835 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 KRT12Q99456 494 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 PDLIM7Q9NR12 457 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 NFASCO94856 1347 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 YBX3P16989 372 aaKnown RBP eCLIP20.85■□□□□ 0.931e-9■■□□□ 14.3
LAPTM4B-204ENST00000619747 SLC47A2Q86VL8 602 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 TRIM50Q86XT4 487 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 MMGT1Q8N4V1 131 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 KREMEN1Q96MU8 473 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 NTPCRQ9BSD7 190 aaKnown RBP20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 AP1M1Q9BXS5 423 aa20.85■□□□□ 0.93
LAPTM4B-204ENST00000619747 KIF4AO95239 1232 aa20.84■□□□□ 0.93
LAPTM4B-204ENST00000619747 IREB2P48200 963 aaKnown RBP20.84■□□□□ 0.93
LAPTM4B-204ENST00000619747 IRX1P78414 480 aaPredicted RBP20.84■□□□□ 0.93
LAPTM4B-204ENST00000619747 DRP2Q13474 957 aa20.84■□□□□ 0.93
LAPTM4B-204ENST00000619747 CTNNBL1Q8WYA6 563 aaPredicted RBP20.84■□□□□ 0.93
LAPTM4B-204ENST00000619747 TATDN2Q93075 761 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms