RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 PPANQ9NQ55 473 aaKnown RBP14.84□□□□□ -0.03
CIITA-213ENST00000618327 CPA4Q9UI42 421 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 STRIP2Q9ULQ0 834 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 ATP8B3O60423 1300 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 C5P01031 1676 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 ECEL1O95672 775 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 RARRES1P49788 294 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 PPIL2Q13356 520 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 MAP7D1Q3KQU3 841 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 GNASQ5JWF2 1037 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 TAB3Q8N5C8 712 aaPredicted RBP14.84□□□□□ -0.03
CIITA-213ENST00000618327 KCTD6Q8NC69 237 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 RFFLQ8WZ73 363 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 NUP85Q9BW27 656 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 SGK1O00141 431 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 NOL3O60936 208 aaKnown RBP14.84□□□□□ -0.03
CIITA-213ENST00000618327 PSMC4P43686 418 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 KCNK18Q7Z418 384 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 PALM2Q8IXS6 379 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 KLRG1Q96E93 195 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 IRX2Q9BZI1 471 aaPredicted RBP14.84□□□□□ -0.03
CIITA-213ENST00000618327 PKD1L3Q7Z443 1732 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 ZNF541Q9H0D2 1346 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 CYP3A7-CYP3A51PA0A087WV96 503 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 CCDC151A5D8V7 595 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 CYP2C8P10632 490 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 CYP3A7P24462 503 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 ANXA13P27216 316 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 ARPP19P56211 112 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 DYNLT1P63172 113 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 ITIH3Q06033 890 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 KLHDC7AQ5VTJ3 777 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 RAB3IL1Q8TBN0 382 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 WDR24Q96S15 920 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 DIS3Q9Y2L1 958 aaKnown RBP14.84□□□□□ -0.03
CIITA-213ENST00000618327 KRT15P19012 456 aa14.83□□□□□ -0.03
CIITA-213ENST00000618327 CPT1AP50416 773 aa14.83□□□□□ -0.03
CIITA-213ENST00000618327 MDM2Q00987 491 aaPredicted RBP14.83□□□□□ -0.03
CIITA-213ENST00000618327 MIPOL1Q8TD10 442 aa14.83□□□□□ -0.03
CIITA-213ENST00000618327 TNFRSF25Q93038 417 aa14.83□□□□□ -0.03
CIITA-213ENST00000618327 NGRNQ9NPE2 291 aaKnown RBP14.83□□□□□ -0.03
CIITA-213ENST00000618327 HOMER3Q9NSC5 361 aa14.83□□□□□ -0.03
CIITA-213ENST00000618327 KCNH4Q9UQ05 1017 aa14.83□□□□□ -0.03
CIITA-213ENST00000618327 BUB1BO60566 1050 aaPredicted RBP14.83□□□□□ -0.04
CIITA-213ENST00000618327 NAMPTP43490 491 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 CASP4P49662 377 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 EPHB4P54760 987 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 PPP2R5DQ14738 602 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 PRPF31Q8WWY3 499 aaKnown RBP14.83□□□□□ -0.04
CIITA-213ENST00000618327 SYT17Q9BSW7 474 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 HAUS2Q9NVX0 235 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 STRNO43815 780 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 PLA2G6O60733 806 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 RARBP10826 455 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 ZNF18P17022 549 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 MAP2K2P36507 400 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 ARL4AP40617 200 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 PMS1P54277 932 aaKnown RBP14.83□□□□□ -0.04
CIITA-213ENST00000618327 FCGRTP55899 365 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 AGAP1Q9UPQ3 857 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 CCDC188H7C350 402 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 M0QYV0 167 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 RGS16O15492 202 aaPredicted RBP14.83□□□□□ -0.04
CIITA-213ENST00000618327 AP5Z1O43299 807 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 NCK2O43639 380 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 SLC26A2P50443 739 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 CDO1Q16878 200 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 LGSNQ5TDP6 509 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 SEPT10Q9P0V9 454 aa14.83□□□□□ -0.04
CIITA-213ENST00000618327 HLA-DRAP01903 254 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 PLTPP55058 493 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 NLRP11P59045 1033 aaKnown RBP14.82□□□□□ -0.04
CIITA-213ENST00000618327 SGSM1Q2NKQ1 1148 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 ZNF484Q5JVG2 852 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 NFRKBQ6P4R8 1299 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 VSIG10LQ86VR7 867 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 ZC3H15Q8WU90 426 aaKnown RBP14.82□□□□□ -0.04
CIITA-213ENST00000618327 ZNF560Q96MR9 790 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 OSBPL9Q96SU4 736 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 CBWD1Q9BRT8 395 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 PDE11AQ9HCR9 933 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 HDAC6Q9UBN7 1215 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 MCF2LO15068 1137 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 ZRANB2O95218 330 aaKnown RBP eCLIP14.82□□□□□ -0.04
CIITA-213ENST00000618327 CTSHP09668 335 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 DGKZQ13574 1117 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 LY6KQ17RY6 165 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 VSIG1Q86XK7 387 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 RIOX2Q8IUF8 465 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 GABPB2Q8TAK5 448 aaPredicted RBP14.82□□□□□ -0.04
CIITA-213ENST00000618327 COL1A1P02452 1464 aaPredicted RBP14.82□□□□□ -0.04
CIITA-213ENST00000618327 SEC31AO94979 1220 aaKnown RBP14.82□□□□□ -0.04
CIITA-213ENST00000618327 ERVK-9P63128 1117 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 ERVK-24P63145 666 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 TMEM132DQ14C87 1099 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 IL17AQ16552 155 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 EFCC1Q9HA90 598 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 PRKAG2Q9UGJ0 569 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 SYNGAP1Q96PV0 1343 aa14.82□□□□□ -0.04
CIITA-213ENST00000618327 A8MXQ7 604 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms