RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 PPP6R3Q5H9R7 873 aaPredicted RBP11.67□□□□□ -0.54
POLR2A-209ENST00000617998 TMTC4Q5T4D3 741 aa11.67□□□□□ -0.54
POLR2A-209ENST00000617998 FSD1LQ9BXM9 530 aa11.67□□□□□ -0.54
POLR2A-209ENST00000617998 TRIM7Q9C029 511 aa11.67□□□□□ -0.54
POLR2A-209ENST00000617998 IGSF9BQ9UPX0 1349 aa11.67□□□□□ -0.54
POLR2A-209ENST00000617998 DUSP11O75319 330 aaKnown RBP11.67□□□□□ -0.54
POLR2A-209ENST00000617998 WASHC5Q12768 1159 aa11.67□□□□□ -0.54
POLR2A-209ENST00000617998 SCYL1Q96KG9 808 aa11.67□□□□□ -0.54
POLR2A-209ENST00000617998 RIT2Q99578 217 aa11.67□□□□□ -0.54
POLR2A-209ENST00000617998 KIFC3Q9BVG8 833 aa11.67□□□□□ -0.54
POLR2A-209ENST00000617998 BRD1O95696 1058 aa11.67□□□□□ -0.54
POLR2A-209ENST00000617998 GNG11P61952 73 aa11.67□□□□□ -0.54
POLR2A-209ENST00000617998 UAP1L1Q3KQV9 507 aa11.67□□□□□ -0.54
POLR2A-209ENST00000617998 SUSD6Q92537 303 aa11.67□□□□□ -0.54
POLR2A-209ENST00000617998 KIF2CQ99661 725 aa11.67□□□□□ -0.54
POLR2A-209ENST00000617998 SEL1LQ9UBV2 794 aa11.67□□□□□ -0.54
POLR2A-209ENST00000617998 STK39Q9UEW8 545 aa11.67□□□□□ -0.54
POLR2A-209ENST00000617998 FZD9O00144 591 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 CTSEP14091 401 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 MFSD4BQ5TF39 518 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 WDR18Q9BV38 432 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 DNAJC6O75061 913 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 SDC4P31431 198 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 GNL1P36915 607 aaPredicted RBP11.66□□□□□ -0.54
POLR2A-209ENST00000617998 MAPK9P45984 424 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 TTC31Q49AM3 519 aaPredicted RBP11.66□□□□□ -0.54
POLR2A-209ENST00000617998 TMEM35BQ8NCS4 154 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 UBE4BO95155 1302 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 NFIBO00712 420 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 CDC25AP30304 524 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 ME3Q16798 604 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 HEATR6Q6AI08 1181 aaKnown RBP11.66□□□□□ -0.54
POLR2A-209ENST00000617998 TMEM270Q6UE05 265 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 IGSF22Q8N9C0 903 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 CCDC110Q8TBZ0 833 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 ATP2A3Q93084 1043 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 STAP2Q9UGK3 403 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.66□□□□□ -0.54
POLR2A-209ENST00000617998 E9PMD0 336 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 MXRA7P84157 204 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 ZNF177Q13360 481 aaPredicted RBP11.66□□□□□ -0.54
POLR2A-209ENST00000617998 POLD3Q15054 466 aaPredicted RBP11.66□□□□□ -0.54
POLR2A-209ENST00000617998 SYTL3Q4VX76 610 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 PABPC1LQ4VXU2 614 aaKnown RBP11.66□□□□□ -0.54
POLR2A-209ENST00000617998 SFR1Q86XK3 245 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 CTAGE3PQ8IX95 158 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 TDRD5Q8NAT2 981 aaKnown RBP11.66□□□□□ -0.54
POLR2A-209ENST00000617998 GMCL1Q96IK5 515 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 SPATA17Q96L03 361 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 CGRRF1Q99675 332 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 FEZ2Q9UHY8 353 aaPredicted RBP11.66□□□□□ -0.54
POLR2A-209ENST00000617998 PCDHB5Q9Y5E4 795 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 MAD1L1Q9Y6D9 718 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 ZNF263O14978 683 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 GTF2F1P35269 517 aaKnown RBP eCLIP11.66□□□□□ -0.54
POLR2A-209ENST00000617998 RD3Q7Z3Z2 195 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 SAPCD2Q86UD0 394 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 CACUL1Q86Y37 369 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 POTEDQ86YR6 584 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 TAB3Q8N5C8 712 aaPredicted RBP11.66□□□□□ -0.54
POLR2A-209ENST00000617998 TIFAQ96CG3 184 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 MAN1C1Q9NR34 630 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 RGL1Q9NZL6 768 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 BZW2Q9Y6E2 419 aaKnown RBP11.66□□□□□ -0.54
POLR2A-209ENST00000617998 ITSN1Q15811 1721 aa11.66□□□□□ -0.54
POLR2A-209ENST00000617998 ATP1A1P05023 1023 aaKnown RBP11.65□□□□□ -0.54
POLR2A-209ENST00000617998 AKT1P31749 480 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 USP41Q3LFD5 358 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 PEX26Q7Z412 305 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 OMDQ99983 421 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 REREQ9P2R6 1566 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 CCDC105Q8IYK2 499 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 REPS2Q8NFH8 660 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 TSSK1BQ9BXA7 367 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 JMJD4Q9H9V9 463 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 GGT7Q9UJ14 662 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 TDP2O95551 362 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 ESRRBO95718 433 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 VCLP18206 1134 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 MAGEA1P43355 309 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 RPS6KA2Q15349 733 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 ADCK2Q7Z695 626 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 RAB44Q7Z6P3 723 aaPredicted RBP11.65□□□□□ -0.54
POLR2A-209ENST00000617998 CARNMT1Q8N4J0 409 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 STMN4Q9H169 189 aaPredicted RBP11.65□□□□□ -0.54
POLR2A-209ENST00000617998 NWD1Q149M9 1564 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 UNCXA6NJT0 531 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 CYB561D2O14569 222 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 DTNBO60941 627 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 CEP112Q8N8E3 955 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 USP38Q8NB14 1042 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 RNF217Q8TC41 542 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 ZNF512BQ96KM6 892 aaPredicted RBP11.65□□□□□ -0.54
POLR2A-209ENST00000617998 GPR20Q99678 358 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 MRIQ9BWK5 157 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 A0A087WZ62 844 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 SMIM10L2AP0DMW4 78 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 SMIM10L2BP0DMW5 78 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 HSD17B4P51659 736 aa11.65□□□□□ -0.54
POLR2A-209ENST00000617998 SCRN1Q12765 414 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms