RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 ABCE1P61221 599 aaKnown RBP9.79□□□□□ -0.84
COL12A1-211ENST00000615798 ARHGEF25Q86VW2 580 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 EVPLQ92817 2033 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 EPN3Q9H201 632 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 NHEJ1Q9H9Q4 299 aaPredicted RBP9.79□□□□□ -0.84
COL12A1-211ENST00000615798 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.79□□□□□ -0.84
COL12A1-211ENST00000615798 DIP2CQ9Y2E4 1556 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 OATP04181 439 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 SRGAP2CP0DJJ0 459 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 DLG1Q12959 904 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 PLAAQ9Y263 795 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 RAB2AP61019 212 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 HIC1Q14526 733 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 HADHQ16836 314 aaKnown RBP9.79□□□□□ -0.84
COL12A1-211ENST00000615798 CENPPQ6IPU0 288 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 ZNF654Q8IZM8 581 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 PFDN2Q9UHV9 154 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 ROBO2Q9HCK4 1378 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 SH3D21A4FU49 640 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 HNRNPH1P31943 449 aaKnown RBP9.79□□□□□ -0.84
COL12A1-211ENST00000615798 FBXW4P57775 412 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 NCF4Q15080 339 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 DENND6BQ8NEG7 585 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 LRRC20Q8TCA0 184 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.79□□□□□ -0.84
COL12A1-211ENST00000615798 SFNP31947 248 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 NLRP11P59045 1033 aaKnown RBP9.79□□□□□ -0.84
COL12A1-211ENST00000615798 PDZK1Q5T2W1 519 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 OSBPL5Q9H0X9 879 aaPredicted RBP9.79□□□□□ -0.84
COL12A1-211ENST00000615798 PIPSLA2A3N6 862 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 PPARAQ07869 468 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 NSUN7Q8NE18 718 aaKnown RBP9.79□□□□□ -0.84
COL12A1-211ENST00000615798 RUBCNLQ9H714 662 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 SH3GLB2Q9NR46 395 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 SGK1O00141 431 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 HIBADHP31937 336 aaKnown RBP9.79□□□□□ -0.84
COL12A1-211ENST00000615798 PTH1RQ03431 593 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 DNAJC3Q13217 504 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 C16orf89Q6UX73 402 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 U2AF1L4Q8WU68 220 aaKnown RBP9.79□□□□□ -0.84
COL12A1-211ENST00000615798 DESI2Q9BSY9 194 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 FAM153AQ9UHL3 310 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 SCN8AQ9UQD0 1980 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 SLFN12Q8IYM2 578 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 EME1Q96AY2 570 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 FAF2Q96CS3 445 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 TUBGCP2Q9BSJ2 902 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 CHID1Q9BWS9 393 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 VAV3Q9UKW4 847 aa9.79□□□□□ -0.84
COL12A1-211ENST00000615798 PGRMC1O00264 195 aaKnown RBP9.78□□□□□ -0.84
COL12A1-211ENST00000615798 UBTFL6P0CB48 400 aaPredicted RBP9.78□□□□□ -0.84
COL12A1-211ENST00000615798 ATP6V1B1P15313 513 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 PECAM1P16284 738 aaPredicted RBP9.78□□□□□ -0.84
COL12A1-211ENST00000615798 PTK2BQ14289 1009 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 TTC33Q6PID6 262 aaPredicted RBP9.78□□□□□ -0.84
COL12A1-211ENST00000615798 ANKRD36BP1Q96IX9 119 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 CACNA2D2Q9NY47 1150 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 EPHB1P54762 984 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 ZNF568Q3ZCX4 644 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 EHD3Q9NZN3 535 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 ARHGEF33A8MVX0 844 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 IL6STP40189 918 aaPredicted RBP9.78□□□□□ -0.84
COL12A1-211ENST00000615798 ARMCX5Q6P1M9 558 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 FBXO38Q6PIJ6 1188 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 SPICE1Q8N0Z3 855 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 ING4Q9UNL4 249 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 RTCBQ9Y3I0 505 aaKnown RBP9.78□□□□□ -0.84
COL12A1-211ENST00000615798 MYH7P12883 1935 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 CNTRLQ7Z7A1 2325 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 CORO7P57737 925 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 ABATP80404 500 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 SCRN1Q12765 414 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 PARD6BQ9BYG5 372 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 REXO4Q9GZR2 422 aaKnown RBP9.78□□□□□ -0.84
COL12A1-211ENST00000615798 CUEDC1Q9NWM3 386 aaPredicted RBP9.78□□□□□ -0.84
COL12A1-211ENST00000615798 RNF103O00237 685 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 CA4P22748 312 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 PIK3R1P27986 724 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 PPARGP37231 505 aaPredicted RBP9.78□□□□□ -0.84
COL12A1-211ENST00000615798 AASDHQ4L235 1098 aaPredicted RBP9.78□□□□□ -0.84
COL12A1-211ENST00000615798 RASSF6Q6ZTQ3 369 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 OTUD6AQ7L8S5 288 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 VAT1LQ9HCJ6 419 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 TAB2Q9NYJ8 693 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 LRWD1Q9UFC0 647 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 H0YCG3 227 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 GOLGA8SH3BPF8 625 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 PDE8BO95263 885 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 CCDC166P0CW27 439 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 CASP5P51878 434 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 RABGAP1LQ5R372 815 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 BBS7Q8IWZ6 715 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 IFNL3Q8IZI9 196 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 EXOSC4Q9NPD3 245 aaKnown RBP9.78□□□□□ -0.84
COL12A1-211ENST00000615798 UBXN8O00124 270 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 ZNF618Q5T7W0 954 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 GALNT6Q8NCL4 622 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 FRMD6Q96NE9 622 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 SLIT1O75093 1534 aa9.78□□□□□ -0.84
COL12A1-211ENST00000615798 TIMM10P62072 90 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms