RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 NOTUMQ6P988 496 aa19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 GPR161Q8N6U8 529 aaKnown RBP19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 RNF149Q8NC42 400 aa19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 ETNPPLQ8TBG4 499 aa19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 TCP11Q8WWU5 503 aa19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 ATRIPQ8WXE1 791 aa19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 FGF14Q92915 247 aa19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 BORCS6Q96GS4 357 aa19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 EIF2AQ9BY44 585 aaKnown RBP19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 TRIM6Q9C030 488 aaPredicted RBP19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 SLKQ9H2G2 1235 aaPredicted RBP19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 FNIP2Q9P278 1114 aa19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 HES2Q9Y543 173 aa19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 SPTBN2O15020 2390 aa19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 GPR179Q6PRD1 2367 aa19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 RPL17P18621 184 aaKnown RBP19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 NCBP1Q09161 790 aaKnown RBP19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 LIN9Q5TKA1 542 aa19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 PARM1Q6UWI2 310 aa19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 MTSS1LQ765P7 747 aa19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 GRASPQ7Z6J2 395 aaPredicted RBP19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 HACE1Q8IYU2 909 aa19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 CCDC51Q96ER9 411 aa19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 YTHDC1Q96MU7 727 aaKnown RBP19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 RPP25Q9BUL9 199 aaKnown RBP19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 GPR62Q9BZJ7 368 aa19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 RNF39Q9H2S5 420 aa19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 DHX33Q9H6R0 707 aaKnown RBP19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 ADAM28Q9UKQ2 775 aa19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 CDV3Q9UKY7 258 aaKnown RBP19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 CDH7Q9ULB5 785 aa19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 PPME1Q9Y570 386 aa19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 PCDHGA2Q9Y5H1 932 aa19.19■□□□□ 0.66
CSNK1E-215ENST00000612795 CYP3A7-CYP3A51PA0A087WV96 503 aa19.18■□□□□ 0.66
CSNK1E-215ENST00000612795 TSPAN1O60635 241 aa19.18■□□□□ 0.66
CSNK1E-215ENST00000612795 CYP3A7P24462 503 aa19.18■□□□□ 0.66
CSNK1E-215ENST00000612795 AXLP30530 894 aa19.18■□□□□ 0.66
CSNK1E-215ENST00000612795 PRKCQQ04759 706 aa19.18■□□□□ 0.66
CSNK1E-215ENST00000612795 CSTF1Q05048 431 aaKnown RBP19.18■□□□□ 0.66
CSNK1E-215ENST00000612795 EMC2Q15006 297 aa19.18■□□□□ 0.66
CSNK1E-215ENST00000612795 GPR65Q8IYL9 337 aa19.18■□□□□ 0.66
CSNK1E-215ENST00000612795 ZNF579Q8NAF0 562 aaKnown RBP19.18■□□□□ 0.66
CSNK1E-215ENST00000612795 CPB2Q96IY4 423 aa19.18■□□□□ 0.66
CSNK1E-215ENST00000612795 SH3GLB2Q9NR46 395 aa19.18■□□□□ 0.66
CSNK1E-215ENST00000612795 MIOSQ9NXC5 875 aa19.18■□□□□ 0.66
CSNK1E-215ENST00000612795 DDX25Q9UHL0 483 aaKnown RBP19.18■□□□□ 0.66
CSNK1E-215ENST00000612795 PCDHA4Q9UN74 947 aa19.18■□□□□ 0.66
CSNK1E-215ENST00000612795 SMG5Q9UPR3 1016 aaKnown RBP19.18■□□□□ 0.66
CSNK1E-215ENST00000612795 KMT2BQ9UMN6 2715 aaPredicted RBP19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 ACACBO00763 2458 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 EML1O00423 815 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 ASAP2O43150 1006 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 MAGEA9P43362 315 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 PFKPQ01813 784 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 LMNB2Q03252 620 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 PCBP1Q15365 356 aaKnown RBP eCLIP19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 NTRK3Q16288 839 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 PPM1LQ5SGD2 360 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 LILRA6Q6PI73 481 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 MOXD1Q6UVY6 613 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 FERMT3Q86UX7 667 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 MBOAT7Q96N66 472 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 DDX23Q9BUQ8 820 aaKnown RBP19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 CSRNP2Q9H175 543 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 NXF3Q9H4D5 531 aaKnown RBP19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 FBXW11Q9UKB1 542 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 USP18Q9UMW8 372 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 POLIQ9UNA4 740 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 GIT1Q9Y2X7 761 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 VWA8A3KMH1 1905 aa19.17■□□□□ 0.66
CSNK1E-215ENST00000612795 FAM170BA6NMN3 283 aa19.16■□□□□ 0.66
CSNK1E-215ENST00000612795 INO80B-WBP1J3KQ70 363 aa19.16■□□□□ 0.66
CSNK1E-215ENST00000612795 IFNAR1P17181 557 aa19.16■□□□□ 0.66
CSNK1E-215ENST00000612795 ATXN1P54253 815 aaKnown RBP19.16■□□□□ 0.66
CSNK1E-215ENST00000612795 NTHL1P78549 312 aa19.16■□□□□ 0.66
CSNK1E-215ENST00000612795 SLC44A4Q53GD3 710 aa19.16■□□□□ 0.66
CSNK1E-215ENST00000612795 PRSS55Q6UWB4 352 aaPredicted RBP19.16■□□□□ 0.66
CSNK1E-215ENST00000612795 TRIM22Q8IYM9 498 aa19.16■□□□□ 0.66
CSNK1E-215ENST00000612795 FGF13Q92913 245 aa19.16■□□□□ 0.66
CSNK1E-215ENST00000612795 JAKMIP1Q96N16 626 aaKnown RBP19.16■□□□□ 0.66
CSNK1E-215ENST00000612795 MTRQ99707 1265 aa19.16■□□□□ 0.66
CSNK1E-215ENST00000612795 OSBPL6Q9BZF3 934 aa19.16■□□□□ 0.66
CSNK1E-215ENST00000612795 LTB4R2Q9NPC1 389 aa19.16■□□□□ 0.66
CSNK1E-215ENST00000612795 SF3B1O75533 1304 aaKnown RBP eCLIP19.16■□□□□ 0.662e-6■■■■■ 43.1
CSNK1E-215ENST00000612795 PRR5-ARHGAP8B1AHC4 643 aa19.15■□□□□ 0.66
CSNK1E-215ENST00000612795 SLC37A4O43826 429 aa19.15■□□□□ 0.66
CSNK1E-215ENST00000612795 TADA2AO75478 443 aa19.15■□□□□ 0.66
CSNK1E-215ENST00000612795 P4HBP07237 508 aaKnown RBP19.15■□□□□ 0.66
CSNK1E-215ENST00000612795 C8AP07357 584 aa19.15■□□□□ 0.66
CSNK1E-215ENST00000612795 HNRNPA1P09651 372 aaKnown RBP eCLIP19.15■□□□□ 0.66
CSNK1E-215ENST00000612795 YWHABP31946 246 aaKnown RBP19.15■□□□□ 0.66
CSNK1E-215ENST00000612795 ARHGAP8P85298 464 aa19.15■□□□□ 0.66
CSNK1E-215ENST00000612795 GRIK3Q13003 919 aa19.15■□□□□ 0.66
CSNK1E-215ENST00000612795 PPP2R5CQ13362 524 aa19.15■□□□□ 0.66
CSNK1E-215ENST00000612795 BLOC1S2Q6QNY1 142 aa19.15■□□□□ 0.66
CSNK1E-215ENST00000612795 RSPO2Q6UXX9 243 aaPredicted RBP19.15■□□□□ 0.66
CSNK1E-215ENST00000612795 BLIDQ8IZY5 108 aa19.15■□□□□ 0.66
CSNK1E-215ENST00000612795 RABGGTAQ92696 567 aa19.15■□□□□ 0.66
CSNK1E-215ENST00000612795 KXD1Q9BQD3 176 aa19.15■□□□□ 0.66
CSNK1E-215ENST00000612795 LXNQ9BS40 222 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms