RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SHBGP04278 402 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 PLS3P13797 630 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 GCKP35557 465 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 MARCKSL1P49006 195 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 ERFP50548 548 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 BASP1P80723 227 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 SYCP2LQ5T4T6 812 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 IZUMO3Q5VZ72 239 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 APOBEC3HQ6NTF7 200 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 SWSAP1Q6NVH7 229 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 DNAJC24Q6P3W2 148 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 CASC4Q6P4E1 433 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 CYB5D1Q6P9G0 228 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 EPM2AIP1Q7L775 607 aaPredicted RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 FAM160B2Q86V87 743 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 P3H4Q92791 437 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 POLR3CQ9BUI4 534 aaPredicted RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 ETNK1Q9HBU6 452 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 ALG13Q9NP73 1137 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 KCNH7Q9NS40 1196 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 DCTN4Q9UJW0 460 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 PFASO15067 1338 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 KIF1AQ12756 1690 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 K7ERI5 159 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 NOP56O00567 594 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 EIF3DO15371 548 aaKnown RBP eCLIP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 TLR3O15455 904 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 SLITRK3O94933 977 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 AGTP01019 485 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 MAN1A1P33908 653 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 CEP128Q6ZU80 1094 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 SLC47A2Q86VL8 602 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 SLC13A5Q86YT5 568 aaPredicted RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 SCYL3Q8IZE3 742 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 BBOF1Q8ND07 529 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 SLC7A3Q8WY07 619 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 RILPQ96NA2 401 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 NCAPGQ9BPX3 1015 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 ZSWIM1Q9BR11 485 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 MKNK1Q9BUB5 465 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 MRPL47Q9HD33 250 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 TOPORSQ9NS56 1045 aaPredicted RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 USP20Q9Y2K6 914 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 MYH2Q9UKX2 1941 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 ARFGEF2Q9Y6D5 1785 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 DCDC2CA8MYV0 355 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 WDR64B1ANS9 1081 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 GOLGA8RI6L899 631 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 STAM2O75886 525 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 TMEM191BP0C7N4 346 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 ANXA13P27216 316 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 COILP38432 576 aaPredicted RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 SCTRP47872 440 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 GPS1Q13098 491 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 ITGB3BPQ13352 177 aaPredicted RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 VPS72Q15906 364 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 GNPTABQ3T906 1256 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 CCDC62Q6P9F0 684 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 TRPM8Q7Z2W7 1104 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 C4orf33Q8N1A6 199 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 PPFIBP2Q8ND30 876 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 LNX1Q8TBB1 728 aaPredicted RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 ATP8B4Q8TF62 1192 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 FAM163AQ96GL9 167 aaPredicted RBP7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 CFAP57Q96MR6 1250 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 PPP1R16BQ96T49 567 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 FAM167BQ9BTA0 163 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 NEUROG2Q9H2A3 272 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 KCNMB3Q9NPA1 279 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 INTUQ9ULD6 942 aa7.33□□□□□ -1.24
SYNPO2-206ENST00000610556 ASNSP08243 561 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 SRGAP2CP0DJJ0 459 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 SPATA31C1P0DKV0 1188 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 PYGMP11217 842 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 SOX10P56693 466 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 PTENP60484 403 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 DLG4P78352 724 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 ALCAMQ13740 583 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 PPP2R5DQ14738 602 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 KRT27Q7Z3Y8 459 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 ARHGEF19Q8IW93 802 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 ACSF2Q96CM8 615 aaPredicted RBP7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 SGSM3Q96HU1 749 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 FAM84AQ96KN4 292 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 SH3GL2Q99962 352 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 MSTO1Q9BUK6 570 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 TRPC5Q9UL62 973 aaPredicted RBP7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 NR2E1Q9Y466 385 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 ASTN1O14525 1302 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 COL22A1Q8NFW1 1626 aaPredicted RBP7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 A0A0G2JND7 137 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 H7C0C1 242 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 MARK3P27448 753 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 RPL21P46778 160 aaKnown RBP7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 ATP5OP48047 213 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 RASSF2P50749 326 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 ITGA8P53708 1063 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 MUM1Q2TAK8 710 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 STRIP1Q5VSL9 837 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms