RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 ZNF280CQ8ND82 737 aa15.15■□□□□ 0.02
PCDHB16-201ENST00000609684 MXRA8Q9BRK3 442 aa15.15■□□□□ 0.02
PCDHB16-201ENST00000609684 DDX56Q9NY93 547 aaKnown RBP15.15■□□□□ 0.02
PCDHB16-201ENST00000609684 MYCP01106 439 aaPredicted RBP15.15■□□□□ 0.02
PCDHB16-201ENST00000609684 ADORA2BP29275 332 aa15.15■□□□□ 0.02
PCDHB16-201ENST00000609684 ARHGEF6Q15052 776 aa15.15■□□□□ 0.02
PCDHB16-201ENST00000609684 CRLF3Q8IUI8 442 aa15.15■□□□□ 0.02
PCDHB16-201ENST00000609684 PPM1NQ8N819 430 aa15.15■□□□□ 0.02
PCDHB16-201ENST00000609684 KIF12Q96FN5 646 aa15.15■□□□□ 0.02
PCDHB16-201ENST00000609684 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.15■□□□□ 0.02
PCDHB16-201ENST00000609684 SLIT1O75093 1534 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 A8MXQ7 604 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 XPAP23025 273 aaPredicted RBP15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 CASP7P55210 303 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 NYAP1Q6ZVC0 841 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 ERGIC2Q96RQ1 377 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 RIT2Q99578 217 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 STAP1Q9ULZ2 295 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 KIAA0391O15091 583 aaKnown RBP15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 TTI1O43156 1089 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 CTIFO43310 598 aaKnown RBP15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 GCKP35557 465 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 BIRC2Q13490 618 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 RBM43Q6ZSC3 357 aaKnown RBP15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 AGBL1Q96MI9 1066 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 GCOM2Q9BZD3 368 aaPredicted RBP15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 TFR2Q9UP52 801 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 PPLO60437 1756 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 DCTN3O75935 186 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 CSPG5O95196 566 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 LRRC14Q15048 493 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 CPA5Q8WXQ8 436 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 ELP3Q9H9T3 547 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 RBM12Q9NTZ6 932 aaKnown RBP15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 TMEM131LA2VDJ0 1609 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 F5H423 210 aaPredicted RBP15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 TTC4O95801 387 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 FGFR4P22455 802 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 CASP2P42575 452 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 EPHB1P54762 984 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 CDH6P55285 790 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 GRB10Q13322 594 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 NCAPHQ15003 741 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 NTRK3Q16288 839 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 SCN4BQ8IWT1 228 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 TTC39CQ8N584 583 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 PPWD1Q96BP3 646 aaKnown RBP15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 TRIM51Q9BSJ1 452 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 KLHL11Q9NVR0 708 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 BAG5Q9UL15 447 aa15.14■□□□□ 0.01
PCDHB16-201ENST00000609684 ASB14A6NK59 587 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 PMLP29590 882 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 SLC10A5Q5PT55 438 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 TADA2BQ86TJ2 420 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 NLRP14Q86W24 1093 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 SYT2Q8N9I0 419 aaPredicted RBP15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 DHX35Q9H5Z1 703 aaKnown RBP15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 KIF9Q9HAQ2 790 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 UVRAGQ9P2Y5 699 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 PPARGC1AQ9UBK2 798 aaKnown RBP15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 DEPDC5O75140 1603 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 PI4K2BG5E9Z4 385 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 HSPA4LO95757 839 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 COPB2P35606 906 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 ROR1Q01973 937 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 TAF1BQ53T94 588 aaPredicted RBP15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 KIAA1755Q5JYT7 1200 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 HEATR6Q6AI08 1181 aaKnown RBP15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 THEM5Q8N1Q8 247 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 VPS39Q96JC1 886 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 FUCA2Q9BTY2 467 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 AGXT2Q9BYV1 514 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 SUCLA2Q9P2R7 463 aaPredicted RBP15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 EPS15L1Q9UBC2 864 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 POLLQ9UGP5 575 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 EIF3DO15371 548 aaKnown RBP eCLIP15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 SLC1A1P43005 524 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 WDR75Q8IWA0 830 aaKnown RBP15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 KCNH7Q9NS40 1196 aa15.13■□□□□ 0.01
PCDHB16-201ENST00000609684 ARSEP51690 589 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 NFIAQ12857 509 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 SLC12A1Q13621 1099 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 PRAMEF18Q5VWM3 479 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 RUBCNQ92622 972 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 INTUQ9ULD6 942 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 KIF20BQ96Q89 1820 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 C19orf81C9J6K1 198 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 KLRC1P26715 233 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 PRKCEQ02156 737 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 EMC2Q15006 297 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 KCNV1Q6PIU1 500 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 CCNI2Q6ZMN8 369 aaPredicted RBP15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 ZC3H18Q86VM9 953 aaKnown RBP15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 NOA1Q8NC60 698 aaKnown RBP15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 SDCCAG3Q96C92 435 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 WDR70Q9NW82 654 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 USH1CQ9Y6N9 552 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 MSH4O15457 936 aa15.12■□□□□ 0.01
PCDHB16-201ENST00000609684 CFLARO15519 480 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms