RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 ZBTB5O15062 677 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 LARGE1O95461 756 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 CALM1P0DP23 149 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 CALM2P0DP24 149 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 CALM3P0DP25 149 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 FGFR1P11362 822 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 PBX3P40426 434 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 PLA2G4AP47712 749 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 CCT2P78371 535 aaKnown RBP13.8□□□□□ -0.2
HLA-F-230ENST00000606273 RTN1Q16799 776 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 XRRA1Q6P2D8 792 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 OTOP3Q7RTS5 596 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 HOMER1Q86YM7 354 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 NME8Q8N427 588 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 GIMAP8Q8ND71 665 aaPredicted RBP13.8□□□□□ -0.2
HLA-F-230ENST00000606273 SEPT1Q8WYJ6 367 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 GLG1Q92896 1179 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 SMARCAD1Q9H4L7 1026 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 ATP6V0A4Q9HBG4 840 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 SPG21Q9NZD8 308 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 DLGAP2Q9P1A6 1054 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 IGSF9Q9P2J2 1179 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 TPCN1Q9ULQ1 816 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 ACACBO00763 2458 aa13.8□□□□□ -0.2
HLA-F-230ENST00000606273 DENND3A2RUS2 1198 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 PRR5-ARHGAP8B1AHC4 643 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 ATP9AO75110 1047 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 CXCL14O95715 111 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 DCNP07585 359 aaKnown RBP13.79□□□□□ -0.2
HLA-F-230ENST00000606273 KIF5BP33176 963 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 SOX11P35716 441 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 METAP2P50579 478 aaKnown RBP eCLIP13.79□□□□□ -0.2
HLA-F-230ENST00000606273 ARHGAP8P85298 464 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 STK3Q13188 491 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 SPECC1Q5M775 1068 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 TMC5Q6UXY8 1006 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 SYNE3Q6ZMZ3 975 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 ZNF558Q96NG5 402 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 CASD1Q96PB1 797 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 SPZ1Q9BXG8 430 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 ELAC1Q9H777 363 aaKnown RBP13.79□□□□□ -0.2
HLA-F-230ENST00000606273 DZANK1Q9NVP4 752 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 TMEM161AQ9NX61 479 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 ST3GAL5Q9UNP4 418 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 NOC2LQ9Y3T9 749 aaKnown RBP13.79□□□□□ -0.2
HLA-F-230ENST00000606273 FRMPD4Q14CM0 1322 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 NID2Q14112 1375 aa13.79□□□□□ -0.2
HLA-F-230ENST00000606273 RPS6KA5O75582 802 aa13.78□□□□□ -0.2
HLA-F-230ENST00000606273 EPCAMP16422 314 aa13.78□□□□□ -0.2
HLA-F-230ENST00000606273 PPM1AP35813 382 aa13.78□□□□□ -0.2
HLA-F-230ENST00000606273 RCAN1P53805 252 aa13.78□□□□□ -0.2
HLA-F-230ENST00000606273 NTRK3Q16288 839 aa13.78□□□□□ -0.2
HLA-F-230ENST00000606273 GPR149Q86SP6 731 aa13.78□□□□□ -0.2
HLA-F-230ENST00000606273 MAML2Q8IZL2 1156 aaPredicted RBP13.78□□□□□ -0.2
HLA-F-230ENST00000606273 SLC22A17Q8WUG5 538 aa13.78□□□□□ -0.2
HLA-F-230ENST00000606273 BORCS6Q96GS4 357 aa13.78□□□□□ -0.2
HLA-F-230ENST00000606273 ABHD17AQ96GS6 310 aa13.78□□□□□ -0.2
HLA-F-230ENST00000606273 RTKNQ9BST9 563 aa13.78□□□□□ -0.2
HLA-F-230ENST00000606273 TMEM117Q9H0C3 514 aa13.78□□□□□ -0.2
HLA-F-230ENST00000606273 CRISPLD1Q9H336 500 aa13.78□□□□□ -0.2
HLA-F-230ENST00000606273 NCDNQ9UBB6 729 aa13.78□□□□□ -0.2
HLA-F-230ENST00000606273 ATXN7L1Q9ULK2 861 aaPredicted RBP13.78□□□□□ -0.2
HLA-F-230ENST00000606273 SIT1Q9Y3P8 196 aa13.78□□□□□ -0.2
HLA-F-230ENST00000606273 PNMA6FA0A0J9YX94 578 aa13.77□□□□□ -0.21
HLA-F-230ENST00000606273 SMIM35A0A1B0GVV1 85 aa13.77□□□□□ -0.21
HLA-F-230ENST00000606273 KINO60870 393 aaKnown RBP13.77□□□□□ -0.21
HLA-F-230ENST00000606273 IGHA1P01876 353 aa13.77□□□□□ -0.21
HLA-F-230ENST00000606273 SMARCA1P28370 1054 aa13.77□□□□□ -0.21
HLA-F-230ENST00000606273 SMTNP53814 917 aa13.77□□□□□ -0.21
HLA-F-230ENST00000606273 ST3GAL1Q11201 340 aa13.77□□□□□ -0.21
HLA-F-230ENST00000606273 ME3Q16798 604 aa13.77□□□□□ -0.21
HLA-F-230ENST00000606273 PHLDB3Q6NSJ2 640 aa13.77□□□□□ -0.21
HLA-F-230ENST00000606273 NLRX1Q86UT6 975 aa13.77□□□□□ -0.21
HLA-F-230ENST00000606273 TRAPPC12Q8WVT3 735 aa13.77□□□□□ -0.21
HLA-F-230ENST00000606273 TMEM40Q8WWA1 233 aa13.77□□□□□ -0.21
HLA-F-230ENST00000606273 RSAD2Q8WXG1 361 aa13.77□□□□□ -0.21
HLA-F-230ENST00000606273 ZNF274Q96GC6 653 aaPredicted RBP13.77□□□□□ -0.21
HLA-F-230ENST00000606273 TBC1D17Q9HA65 648 aa13.77□□□□□ -0.21
HLA-F-230ENST00000606273 RBM28Q9NW13 759 aaKnown RBP13.77□□□□□ -0.21
HLA-F-230ENST00000606273 SERTAD1Q9UHV2 236 aa13.77□□□□□ -0.21
HLA-F-230ENST00000606273 CA14Q9ULX7 337 aa13.77□□□□□ -0.21
HLA-F-230ENST00000606273 LOC100996750A0A140TA64 210 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 PIK3CDO00329 1044 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 GPR182O15218 404 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 BNIP3LO60238 219 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 PRKCSHP14314 528 aaPredicted RBP13.76□□□□□ -0.21
HLA-F-230ENST00000606273 KCNA2P16389 499 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 RFX1P22670 979 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 TGM1P22735 817 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 GNAQP50148 359 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 LMNB2Q03252 620 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 SCRN1Q12765 414 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 TRAF1Q13077 416 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 PCNX4Q63HM2 1172 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 C1orf229Q6ZS94 237 aaPredicted RBP13.76□□□□□ -0.21
HLA-F-230ENST00000606273 CCDC149Q6ZUS6 474 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 SLC39A11Q8N1S5 342 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 SLC44A3Q8N4M1 653 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 NECAB1Q8N987 351 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 PHKBQ93100 1093 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms