RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 ACKR2O00590 384 aa13.55□□□□□ -0.24
CTSA-210ENST00000606000 N4BP3O15049 544 aa13.55□□□□□ -0.24
CTSA-210ENST00000606000 PLA2G4BP0C869 781 aa13.55□□□□□ -0.24
CTSA-210ENST00000606000 PDCP20941 246 aa13.55□□□□□ -0.24
CTSA-210ENST00000606000 MARCKSP29966 332 aaPredicted RBP13.55□□□□□ -0.24
CTSA-210ENST00000606000 OR1G1P47890 313 aa13.55□□□□□ -0.24
CTSA-210ENST00000606000 DSC1Q08554 894 aa13.55□□□□□ -0.24
CTSA-210ENST00000606000 SMAD4Q13485 552 aaKnown RBP13.55□□□□□ -0.24
CTSA-210ENST00000606000 DHX8Q14562 1220 aaKnown RBP13.55□□□□□ -0.24
CTSA-210ENST00000606000 PDE12Q6L8Q7 609 aaKnown RBP13.55□□□□□ -0.24
CTSA-210ENST00000606000 MRPL43Q8N983 215 aaKnown RBP13.55□□□□□ -0.24
CTSA-210ENST00000606000 SYT2Q8N9I0 419 aaPredicted RBP13.55□□□□□ -0.24
CTSA-210ENST00000606000 FEZF2Q8TBJ5 459 aa13.55□□□□□ -0.24
CTSA-210ENST00000606000 RSPH1Q8WYR4 309 aa13.55□□□□□ -0.24
CTSA-210ENST00000606000 TMEM175Q9BSA9 504 aa13.55□□□□□ -0.24
CTSA-210ENST00000606000 NGRNQ9NPE2 291 aaKnown RBP13.55□□□□□ -0.24
CTSA-210ENST00000606000 UBN1Q9NPG3 1134 aa13.55□□□□□ -0.24
CTSA-210ENST00000606000 BLOC1S4Q9NUP1 217 aa13.55□□□□□ -0.24
CTSA-210ENST00000606000 KANSL3Q9P2N6 904 aa13.55□□□□□ -0.24
CTSA-210ENST00000606000 FAN1Q9Y2M0 1017 aa13.55□□□□□ -0.24
CTSA-210ENST00000606000 GIT1Q9Y2X7 761 aa13.55□□□□□ -0.24
CTSA-210ENST00000606000 PLXNA3P51805 1871 aa13.55□□□□□ -0.24
CTSA-210ENST00000606000 PTGESO14684 152 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 SLC16A4O15374 487 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 CLASP2O75122 1294 aaKnown RBP13.54□□□□□ -0.24
CTSA-210ENST00000606000 RECQL4O94761 1208 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 CXCL14O95715 111 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 CTSAP10619 480 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 PLCG1P19174 1290 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 GUCY2CP25092 1073 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 SSTR3P32745 418 aaPredicted RBP13.54□□□□□ -0.24
CTSA-210ENST00000606000 ZP2Q05996 745 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 COASYQ13057 564 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 DMP1Q13316 513 aaPredicted RBP13.54□□□□□ -0.24
CTSA-210ENST00000606000 SMAD2Q15796 467 aaKnown RBP13.54□□□□□ -0.24
CTSA-210ENST00000606000 PUS10Q3MIT2 529 aaKnown RBP13.54□□□□□ -0.24
CTSA-210ENST00000606000 ARSHQ5FYA8 562 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 ATF7IP2Q5U623 682 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 TAS1R1Q7RTX1 841 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 CEP120Q8N960 986 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 SMRP1Q8NCR6 262 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 SNX21Q969T3 373 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 EPSTI1Q96J88 318 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 DRC1Q96MC2 740 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 USP28Q96RU2 1077 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 CDCA3Q99618 268 aaPredicted RBP13.54□□□□□ -0.24
CTSA-210ENST00000606000 PAAF1Q9BRP4 392 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 NT5C3AQ9H0P0 336 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 KMT5AQ9NQR1 393 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 ARHGAP28Q9P2N2 729 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 FBXO2Q9UK22 296 aaPredicted RBP13.54□□□□□ -0.24
CTSA-210ENST00000606000 GDAQ9Y2T3 454 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 USP15Q9Y4E8 981 aaPredicted RBP13.54□□□□□ -0.24
CTSA-210ENST00000606000 HCFC2Q9Y5Z7 792 aa13.54□□□□□ -0.24
CTSA-210ENST00000606000 MUC3AQ02505 3323 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 K7ERI5 159 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 STX6O43752 255 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 BMP15O95972 392 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 ALDH2P05091 517 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 UBA7P41226 1012 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 EFNA5P52803 228 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 GRIK3Q13003 919 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 MCM6Q14566 821 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 PTPN14Q15678 1187 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 GLRA4Q5JXX5 417 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 FOXD4L5Q5VV16 416 aaPredicted RBP13.53□□□□□ -0.24
CTSA-210ENST00000606000 ANKRD54Q6NXT1 300 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 KANK3Q6NY19 840 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 SYCE2Q6PIF2 218 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 GPBP1Q86WP2 473 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 HACE1Q8IYU2 909 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 GJD3Q8N144 294 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 HASPINQ8TF76 798 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 FOXD4L4Q8WXT5 416 aaPredicted RBP13.53□□□□□ -0.24
CTSA-210ENST00000606000 B3GALT6Q96L58 329 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 AK8Q96MA6 479 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 CLIC6Q96NY7 704 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 RPS6KC1Q96S38 1066 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 REEP2Q9BRK0 252 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 TARS2Q9BW92 718 aaKnown RBP13.53□□□□□ -0.24
CTSA-210ENST00000606000 CDT1Q9H211 546 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 EPHX3Q9H6B9 360 aa13.53□□□□□ -0.24
CTSA-210ENST00000606000 CASTOR2A6NHX0 329 aa13.52□□□□□ -0.25
CTSA-210ENST00000606000 C2CD2LO14523 706 aa13.52□□□□□ -0.25
CTSA-210ENST00000606000 EFEMP2O95967 443 aa13.52□□□□□ -0.25
CTSA-210ENST00000606000 PLS3P13797 630 aa13.52□□□□□ -0.25
CTSA-210ENST00000606000 EPCAMP16422 314 aa13.52□□□□□ -0.25
CTSA-210ENST00000606000 LONP1P36776 959 aaKnown RBP13.52□□□□□ -0.25
CTSA-210ENST00000606000 OSTNP61366 133 aa13.52□□□□□ -0.25
CTSA-210ENST00000606000 ZBTB33Q86T24 672 aa13.52□□□□□ -0.25
CTSA-210ENST00000606000 HSCBQ8IWL3 235 aa13.52□□□□□ -0.25
CTSA-210ENST00000606000 RNF168Q8IYW5 571 aaPredicted RBP13.52□□□□□ -0.25
CTSA-210ENST00000606000 SPRYD3Q8NCJ5 442 aa13.52□□□□□ -0.25
CTSA-210ENST00000606000 RASSF8Q8NHQ8 419 aa13.52□□□□□ -0.25
CTSA-210ENST00000606000 RAD54LQ92698 747 aa13.52□□□□□ -0.25
CTSA-210ENST00000606000 CALML4Q96GE6 196 aa13.52□□□□□ -0.25
CTSA-210ENST00000606000 ACO2Q99798 780 aaKnown RBP13.52□□□□□ -0.25
CTSA-210ENST00000606000 ADPGKQ9BRR6 497 aa13.52□□□□□ -0.25
CTSA-210ENST00000606000 HERC2P3Q9BVR0 1158 aa13.52□□□□□ -0.25
CTSA-210ENST00000606000 TRIP11Q15643 1979 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms