RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 GYPCP04921 128 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 RPSAP08865 295 aaKnown RBP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 GSTA2P09210 222 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 DRD4P21917 467 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 GBP1P32455 592 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 KIF5BP33176 963 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 ABCD1P33897 745 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 HSPA9P38646 679 aaKnown RBP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 PSMC4P43686 418 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 GALK1P51570 392 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 ZNF131P52739 623 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 RBM5P52756 815 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 HDLBPQ00341 1268 aaKnown RBP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 CEBPZQ03701 1054 aaKnown RBP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 GOLGA8FQ08AF8 430 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 GOLGA8DPQ0D2H9 430 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 KIF5AQ12840 1032 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 MAP3K12Q12852 859 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 PAK2Q13177 524 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 SNX1Q13596 522 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 CUL3Q13618 768 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 CUL4BQ13620 913 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 BYSLQ13895 437 aaKnown RBP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 MEA1Q16626 185 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 LONRF3Q496Y0 759 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 ACCSLQ4AC99 568 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 MCMDC2Q4G0Z9 681 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 THEMIS2Q5TEJ8 643 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 GKAP1Q5VSY0 366 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 NCAPH2Q6IBW4 605 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 ARHGAP18Q8N392 663 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 ZNF513Q8N8E2 541 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 GBP7Q8N8V2 638 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 CCDC63Q8NA47 563 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 SPATA4Q8NEY3 305 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 IRGQQ8WZA9 623 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 NCSTNQ92542 709 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 TBC1D5Q92609 795 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 HVCN1Q96D96 273 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 THOC1Q96FV9 657 aaKnown RBP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 C8orf76Q96K31 380 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 SIGLEC10Q96LC7 697 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 FAM227BQ96M60 508 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 GDAP1L1Q96MZ0 367 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 ZIM3Q96PE6 472 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 TRAPPC9Q96Q05 1148 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 GSDMAQ96QA5 445 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 TSPAN18Q96SJ8 248 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 RUFY1Q96T51 708 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 MAP3K14Q99558 947 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 DNAJC7Q99615 494 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 GORASP1Q9BQQ3 440 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 CDK19Q9BWU1 502 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 ASPNQ9BXN1 380 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 TSGA10Q9BZW7 698 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 FAM192AQ9GZU8 254 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 IQCGQ9H095 443 aaKnown RBP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 TAF1DQ9H5J8 278 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 CNOT10Q9H9A5 744 aaKnown RBP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 INCENPQ9NQS7 918 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 ABHD10Q9NUJ1 306 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 HAUS2Q9NVX0 235 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 ITGB1BP2Q9UKP3 347 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 TMCO1Q9UM00 188 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 SNX12Q9UMY4 172 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 REXO2Q9Y3B8 237 aaKnown RBP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 RIPOR2Q9Y4F9 1068 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 CORINQ9Y5Q5 1042 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 IVNS1ABPQ9Y6Y0 642 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 AGLP35573 1532 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 MYH7BA7E2Y1 1941 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 MYO5BQ9ULV0 1848 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 MRC1P22897 1456 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 A0A0G2JLL6 359 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 GRID2IPA4D2P6 1211 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 UPK3BL1B0FP48 263 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 UPK3BL2E5RIL1 263 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 H0YGN5 161 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 CES2O00748 559 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 KIF3BO15066 747 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 TEX33O43247 280 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 PSPNO60542 156 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 BUB1BO60566 1050 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 LRRN2O75325 713 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 USP2O75604 605 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 LCA5LO95447 670 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 ATP1A1P05023 1023 aaKnown RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 CYP21A2P08686 494 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 MYBP10242 640 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 IDO1P14902 403 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 NQO1P15559 274 aaKnown RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 TFE3P19532 575 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 YY1P25490 414 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 HNRNPH3P31942 346 aaKnown RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 SKIV2L2P42285 1042 aaKnown RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 PAFAH1B1P43034 410 aa4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 FXR1P51114 621 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 AFF3P51826 1226 aaKnown RBP4.44□□□□□ -1.7
HMGB1P50-201ENST00000605814 KIF23Q02241 960 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms