RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 CARD9Q9H257 536 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 SIRT5Q9NXA8 310 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 CABP1Q9NZU7 370 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 ZNF69Q9UC07 566 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 PGAP2Q9UHJ9 254 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 LIMCH1Q9UPQ0 1083 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 ZNF148Q9UQR1 794 aa5.07□□□□□ -1.6
LINC01109-201ENST00000603837 NOSIPQ9Y314 301 aaKnown RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 RRP7AQ9Y3A4 280 aaKnown RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 DNMT3AQ9Y6K1 912 aaPredicted RBP5.07□□□□□ -1.6
LINC01109-201ENST00000603837 NPHP4O75161 1426 aaPredicted RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 SOBPA7XYQ1 873 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 TMEM229AB2RXF0 380 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 E7EVH7 732 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 CLASP2O75122 1294 aaKnown RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 ASMTLO95671 621 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 EOMESO95936 686 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 PDHA1P08559 390 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 GHRP10912 638 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 TOP1P11387 765 aaKnown RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 PCK1P35558 622 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 CD97P48960 835 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 CCT8P50990 548 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 YARSP54577 528 aaKnown RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 MTTPP55157 894 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 RAC1P63000 192 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 BEX3Q00994 111 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 EXOSC9Q06265 439 aaKnown RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 C17orf67Q0P5P2 114 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 LRRC74AQ0VAA2 488 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 KIF5AQ12840 1032 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 OASLQ15646 514 aaKnown RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 HSP90AA5PQ58FG0 334 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 METTL11BQ5VVY1 283 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 ALS2CLQ60I27 953 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 KCTD16Q68DU8 428 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 GRAMD4Q6IC98 578 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 PDE12Q6L8Q7 609 aaKnown RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 LIN54Q6MZP7 749 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 IGF2-ASQ6U949 168 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 LPCAT2Q7L5N7 544 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 SPATA2LQ8IUW3 424 aaPredicted RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 GRAMD2AQ8IUY3 354 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 RTKN2Q8IZC4 609 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 NSUN7Q8NE18 718 aaKnown RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 CYFIP2Q96F07 1278 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 NAP1L3Q99457 506 aaPredicted RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 HESX1Q9UBX0 185 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 DNMT3LQ9UJW3 386 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 PALD1Q9ULE6 856 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 STRIP2Q9ULQ0 834 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 HCN4Q9Y3Q4 1203 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 N4BP2Q86UW6 1770 aaPredicted RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 KNDC1Q76NI1 1749 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 TTC21AQ8NDW8 1320 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 GNAT3A8MTJ3 354 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 EYA2O00167 538 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 WASLO00401 505 aaPredicted RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 SIN3BO75182 1162 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 HSPA4LO95757 839 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 XPAP23025 273 aaPredicted RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 GPC1P35052 558 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 HNF1BP35680 557 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 RNF144AP50876 292 aaPredicted RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 SEC24CP53992 1094 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 YBEYP58557 167 aaPredicted RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 IL1RL1Q01638 556 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 BYSLQ13895 437 aaKnown RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 CCDC122Q5T0U0 273 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 MZT2BQ6NZ67 158 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 MAGEB6Q8N7X4 407 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 NKAIN3Q8N8D7 197 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 NOA1Q8NC60 698 aaKnown RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 BBOF1Q8ND07 529 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 LINS1Q8NG48 757 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 TMEM237Q96Q45 408 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 CRB3Q9BUF7 120 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 RHOBTB2Q9BYZ6 727 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 SCAND2PQ9GZW5 306 aaPredicted RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 NSRP1Q9H0G5 558 aaKnown RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 GGNBP2Q9H3C7 697 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 NDST4Q9H3R1 872 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 CRLF2Q9HC73 371 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 SRA1Q9HD15 236 aaKnown RBP5.06□□□□□ -1.6
LINC01109-201ENST00000603837 GPR108Q9NPR9 543 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 TCP11L1Q9NUJ3 509 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 SERTAD1Q9UHV2 236 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 TTLL3Q9Y4R7 772 aa5.06□□□□□ -1.6
LINC01109-201ENST00000603837 FAM196BA6NMK8 535 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 ZW10O43264 779 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 MGEA5O60502 916 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 MAP3K6O95382 1288 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 GARTP22102 1010 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 GSTT1P30711 240 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 GUCY1A3Q02108 690 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CENPCQ03188 943 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 SULT2A1Q06520 285 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 TNIP1Q15025 636 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 PRICKLE2Q7Z3G6 844 aa5.05□□□□□ -1.6
LINC01109-201ENST00000603837 CEP97Q8IW35 865 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms