RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 EXOC7Q9UPT5 735 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 NLRC5Q86WI3 1866 aa17.05■□□□□ 0.32
CDCA3-211ENST00000603043 CITO14578 2027 aa17.05■□□□□ 0.32
CDCA3-211ENST00000603043 LCHNA4D1U4 455 aa17.05■□□□□ 0.32
CDCA3-211ENST00000603043 EIF3DO15371 548 aaKnown RBP eCLIP17.05■□□□□ 0.32
CDCA3-211ENST00000603043 PRPF6O94906 941 aaKnown RBP17.05■□□□□ 0.32
CDCA3-211ENST00000603043 ITGA4P13612 1032 aa17.05■□□□□ 0.32
CDCA3-211ENST00000603043 PSMD2Q13200 908 aa17.05■□□□□ 0.32
CDCA3-211ENST00000603043 ZBTB33Q86T24 672 aa17.05■□□□□ 0.32
CDCA3-211ENST00000603043 ZBTB45Q96K62 511 aaPredicted RBP17.05■□□□□ 0.32
CDCA3-211ENST00000603043 APOL6Q9BWW8 343 aa17.05■□□□□ 0.32
CDCA3-211ENST00000603043 CDT1Q9H211 546 aa17.05■□□□□ 0.32
CDCA3-211ENST00000603043 NKX2-4Q9H2Z4 354 aa17.05■□□□□ 0.32
CDCA3-211ENST00000603043 RNF19AQ9NV58 838 aa17.05■□□□□ 0.32
CDCA3-211ENST00000603043 SZT2Q5T011 3432 aa17.05■□□□□ 0.32
CDCA3-211ENST00000603043 ABLIM1O14639 778 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 CLDN3O15551 220 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 RHOBTB3O94955 611 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 MATR3P43243 847 aaKnown RBP eCLIP17.04■□□□□ 0.32
CDCA3-211ENST00000603043 BTG3Q14201 252 aaPredicted RBP17.04■□□□□ 0.32
CDCA3-211ENST00000603043 NOLC1Q14978 699 aaKnown RBP eCLIP17.04■□□□□ 0.32
CDCA3-211ENST00000603043 PAN2Q504Q3 1202 aaKnown RBP17.04■□□□□ 0.32
CDCA3-211ENST00000603043 CLLU1OSQ5K130 101 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 AGMOQ6ZNB7 445 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 CMTR2Q8IYT2 770 aaKnown RBP17.04■□□□□ 0.32
CDCA3-211ENST00000603043 SP7Q8TDD2 431 aaPredicted RBP17.04■□□□□ 0.32
CDCA3-211ENST00000603043 TMEM206Q9H813 350 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 RSAD1Q9HA92 442 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 SLC28A3Q9HAS3 691 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 CDH23Q9H251 3354 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 TRIP11Q15643 1979 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 CHD9Q3L8U1 2897 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 KIAA1671Q9BY89 1806 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 TDRD15B5MCY1 1934 aaKnown RBP17.04■□□□□ 0.32
CDCA3-211ENST00000603043 MYO9BQ13459 2157 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 TBKBP1A7MCY6 615 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 SMC2O95347 1197 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 MCF2P10911 925 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 HARSP12081 509 aaKnown RBP17.04■□□□□ 0.32
CDCA3-211ENST00000603043 STK4Q13043 487 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 KCNB1Q14721 858 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 SLC39A4Q6P5W5 647 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 GLB1LQ6UWU2 654 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 EPM2AIP1Q7L775 607 aaPredicted RBP17.04■□□□□ 0.32
CDCA3-211ENST00000603043 SYCP3Q8IZU3 236 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 HELQQ8TDG4 1101 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 ERCC4Q92889 916 aaPredicted RBP17.04■□□□□ 0.32
CDCA3-211ENST00000603043 TMEM117Q9H0C3 514 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 RNF39Q9H2S5 420 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 IKZF4Q9H2S9 585 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 UBN1Q9NPG3 1134 aa17.04■□□□□ 0.32
CDCA3-211ENST00000603043 RALGAPA2Q2PPJ7 1873 aa17.03■□□□□ 0.32
CDCA3-211ENST00000603043 AKAP5P24588 427 aa17.03■□□□□ 0.32
CDCA3-211ENST00000603043 MCL1Q07820 350 aa17.03■□□□□ 0.32
CDCA3-211ENST00000603043 PPP2R2DQ66LE6 453 aa17.03■□□□□ 0.32
CDCA3-211ENST00000603043 KIAA0895Q8NCT3 520 aa17.03■□□□□ 0.32
CDCA3-211ENST00000603043 SCFD1Q8WVM8 642 aa17.03■□□□□ 0.32
CDCA3-211ENST00000603043 SMARCE1Q969G3 411 aa17.03■□□□□ 0.32
CDCA3-211ENST00000603043 CASD1Q96PB1 797 aa17.03■□□□□ 0.32
CDCA3-211ENST00000603043 GSDMAQ96QA5 445 aa17.03■□□□□ 0.32
CDCA3-211ENST00000603043 RMND1Q9NWS8 449 aa17.03■□□□□ 0.32
CDCA3-211ENST00000603043 PCDHA5Q9Y5H7 936 aa17.03■□□□□ 0.32
CDCA3-211ENST00000603043 UBE4BO95155 1302 aa17.03■□□□□ 0.32
CDCA3-211ENST00000603043 LINC01553A4QN01 128 aa17.02■□□□□ 0.32
CDCA3-211ENST00000603043 FIBCD1Q8N539 461 aa17.02■□□□□ 0.32
CDCA3-211ENST00000603043 CEP120Q8N960 986 aa17.02■□□□□ 0.32
CDCA3-211ENST00000603043 SPATA20Q8TB22 786 aa17.02■□□□□ 0.32
CDCA3-211ENST00000603043 ZNF507Q8TCN5 953 aa17.02■□□□□ 0.32
CDCA3-211ENST00000603043 RSPH1Q8WYR4 309 aa17.02■□□□□ 0.32
CDCA3-211ENST00000603043 SNTG2Q9NY99 539 aa17.02■□□□□ 0.32
CDCA3-211ENST00000603043 CHD7Q9P2D1 2997 aa17.02■□□□□ 0.32
CDCA3-211ENST00000603043 PARP2Q9UGN5 583 aa17.02■□□□□ 0.32
CDCA3-211ENST00000603043 INPP5FQ9Y2H2 1132 aa17.02■□□□□ 0.32
CDCA3-211ENST00000603043 TISP43B9A030 160 aa17.02■□□□□ 0.31
CDCA3-211ENST00000603043 ANKRD63C9JTQ0 380 aa17.02■□□□□ 0.31
CDCA3-211ENST00000603043 OFD1O75665 1012 aa17.02■□□□□ 0.31
CDCA3-211ENST00000603043 ARHGEF15O94989 841 aa17.02■□□□□ 0.31
CDCA3-211ENST00000603043 MLH1P40692 756 aa17.02■□□□□ 0.31
CDCA3-211ENST00000603043 FXR1P51114 621 aaKnown RBP eCLIP17.02■□□□□ 0.31
CDCA3-211ENST00000603043 SLFN12LQ6IEE8 588 aa17.02■□□□□ 0.31
CDCA3-211ENST00000603043 THNSL1Q8IYQ7 743 aa17.02■□□□□ 0.31
CDCA3-211ENST00000603043 MRPL9Q9BYD2 267 aaKnown RBP17.02■□□□□ 0.31
CDCA3-211ENST00000603043 HAPLN2Q9GZV7 340 aa17.02■□□□□ 0.31
CDCA3-211ENST00000603043 GDAQ9Y2T3 454 aa17.02■□□□□ 0.31
CDCA3-211ENST00000603043 GIT1Q9Y2X7 761 aa17.02■□□□□ 0.31
CDCA3-211ENST00000603043 ZMYM2Q9UBW7 1377 aa17.01■□□□□ 0.31
CDCA3-211ENST00000603043 A0A0B4J269 797 aa17.01■□□□□ 0.31
CDCA3-211ENST00000603043 RECQL4O94761 1208 aa17.01■□□□□ 0.31
CDCA3-211ENST00000603043 HOXD13P35453 343 aa17.01■□□□□ 0.31
CDCA3-211ENST00000603043 GRM5P41594 1212 aa17.01■□□□□ 0.31
CDCA3-211ENST00000603043 OSTNP61366 133 aa17.01■□□□□ 0.31
CDCA3-211ENST00000603043 TAP1Q03518 808 aa17.01■□□□□ 0.31
CDCA3-211ENST00000603043 CAMK4Q16566 473 aa17.01■□□□□ 0.31
CDCA3-211ENST00000603043 BMT2Q1RMZ1 405 aa17.01■□□□□ 0.31
CDCA3-211ENST00000603043 NELFCDQ8IXH7 590 aa17.01■□□□□ 0.31
CDCA3-211ENST00000603043 LRRC43Q8N309 656 aa17.01■□□□□ 0.31
CDCA3-211ENST00000603043 ZFP42Q96MM3 310 aa17.01■□□□□ 0.31
CDCA3-211ENST00000603043 GAD1Q99259 594 aa17.01■□□□□ 0.31
CDCA3-211ENST00000603043 MSTO1Q9BUK6 570 aa17.01■□□□□ 0.31
CDCA3-211ENST00000603043 CCDC94Q9BW85 323 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms