RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 TBC1D7Q9P0N9 293 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 EXOC7Q9UPT5 735 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 USP20Q9Y2K6 914 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 PCDHB12Q9Y5F1 795 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 MRPL42Q9Y6G3 142 aaKnown RBP17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 PVALEFA0A1B0GWK0 134 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 HNRNPDLO14979 420 aaKnown RBP17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 OFD1O75665 1012 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 TOM1L1O75674 476 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 ZNF202O95125 648 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 EDN1P05305 212 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 LAG3P18627 525 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 BMPR1AP36894 532 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 EPC2Q52LR7 807 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 EEF1DP3Q658K8 133 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 AGMOQ6ZNB7 445 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 UNC13DQ70J99 1090 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 ZBTB33Q86T24 672 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 RPS6KC1Q96S38 1066 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 CCDC94Q9BW85 323 aaPredicted RBP17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 PLVAPQ9BX97 442 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 BLZF1Q9H2G9 400 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 GOLPH3LQ9H4A5 285 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 ANKFY1Q9P2R3 1169 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 HES2Q9Y543 173 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 TRIP11Q15643 1979 aa17.55■□□□□ 0.4
PPFIA3-213ENST00000602905 CLDN3O15551 220 aa17.54■□□□□ 0.4
PPFIA3-213ENST00000602905 GTPBP6O43824 516 aaPredicted RBP17.54■□□□□ 0.4
PPFIA3-213ENST00000602905 MCF2P10911 925 aa17.54■□□□□ 0.4
PPFIA3-213ENST00000602905 HARSP12081 509 aaKnown RBP17.54■□□□□ 0.4
PPFIA3-213ENST00000602905 YARSP54577 528 aaKnown RBP17.54■□□□□ 0.4
PPFIA3-213ENST00000602905 NOLC1Q14978 699 aaKnown RBP eCLIP17.54■□□□□ 0.4
PPFIA3-213ENST00000602905 KRBA2Q6ZNG9 492 aa17.54■□□□□ 0.4
PPFIA3-213ENST00000602905 SYCP3Q8IZU3 236 aa17.54■□□□□ 0.4
PPFIA3-213ENST00000602905 ACCSQ96QU6 501 aa17.54■□□□□ 0.4
PPFIA3-213ENST00000602905 FIZ1Q96SL8 496 aa17.54■□□□□ 0.4
PPFIA3-213ENST00000602905 CDX2Q99626 313 aaPredicted RBP17.54■□□□□ 0.4
PPFIA3-213ENST00000602905 C11orf84Q9BUA3 381 aaPredicted RBP17.54■□□□□ 0.4
PPFIA3-213ENST00000602905 SNTG2Q9NY99 539 aa17.54■□□□□ 0.4
PPFIA3-213ENST00000602905 HOOK1Q9UJC3 728 aaKnown RBP17.54■□□□□ 0.4
PPFIA3-213ENST00000602905 ZMYM2Q9UBW7 1377 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 MEIS3P2A8K0S8 358 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 PIGRP01833 764 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 FOSL2P15408 326 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 AKAP5P24588 427 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 MLH1P40692 756 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 FAM160A1Q05DH4 1040 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 GPM6BQ13491 265 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 CUL4BQ13620 913 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 KYAT1Q16773 422 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 ZC2HC1CQ53FD0 456 aaPredicted RBP17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 FAM26FQ5R3K3 315 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 L1TD1Q5T7N2 865 aaKnown RBP17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 SLFN12LQ6IEE8 588 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 MAP4K3Q8IVH8 894 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 GRAMD1CQ8IYS0 662 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 MYLIPQ8WY64 445 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 GAD1Q99259 594 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 CDT1Q9H211 546 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 RNF39Q9H2S5 420 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 TOPORSQ9NS56 1045 aaPredicted RBP17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 EXOC1Q9NV70 894 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 GDAQ9Y2T3 454 aa17.53■□□□□ 0.4
PPFIA3-213ENST00000602905 ARL5CA6NH57 179 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 C5orf67F2Z3F1 127 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 IGFBP4P22692 258 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 PROZP22891 400 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 PPM1AP35813 382 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 GRM5P41594 1212 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 ALDH7A1P49419 539 aaKnown RBP17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 THNSL1Q8IYQ7 743 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 COLGALT1Q8NBJ5 622 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 TMEM87AQ8NBN3 555 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 P2RX5Q93086 422 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 ZNF558Q96NG5 402 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 GUCD1Q96NT3 240 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 ACAP3Q96P50 834 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 GBP3Q9H0R5 595 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 CWH43Q9H720 699 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 TMEM206Q9H813 350 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 PTPRHQ9HD43 1115 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 TBC1D13Q9NVG8 400 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 KLK14Q9P0G3 267 aa17.52■□□□□ 0.4
PPFIA3-213ENST00000602905 H3BNC9 293 aa17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 RFXAPO00287 272 aa17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 ZC3H11AO75152 810 aaKnown RBP eCLIP17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 NR1I2O75469 434 aa17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 PPP1R37O75864 691 aa17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 RECQL4O94761 1208 aa17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 POMCP01189 267 aa17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 MYBP10242 640 aa17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 CASP1P29466 404 aa17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 OSTNP61366 133 aa17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 MCL1Q07820 350 aa17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 POSTNQ15063 836 aa17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 PTPROQ16827 1216 aa17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 LRRC55Q6ZSA7 311 aa17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 SPRED2Q7Z698 418 aa17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 FMR1NBQ8N0W7 255 aaPredicted RBP17.51■□□□□ 0.39
PPFIA3-213ENST00000602905 GDPD5Q8WTR4 605 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms