RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 S100BP04271 92 aaPredicted RBP10.48□□□□□ -0.73
NFKB1-212ENST00000600343 UQCRBP14927 111 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 AMPD1P23109 780 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 HOXD10P28358 340 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 AP2B1P63010 937 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 TUBA4AP68366 448 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 BTKQ06187 659 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 PDK3Q15120 406 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 ZNF280CQ8ND82 737 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 CCDC85AQ96PX6 553 aaPredicted RBP10.48□□□□□ -0.73
NFKB1-212ENST00000600343 EMILIN3Q9NT22 766 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 TBC1D23Q9NUY8 699 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 UVRAGQ9P2Y5 699 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 PHTF1Q9UMS5 762 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 RPTORQ8N122 1335 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.48□□□□□ -0.73
NFKB1-212ENST00000600343 SSU72P8A0A1W2PR75 194 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 NBPF26B4DH59 902 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 TBCAO75347 108 aaKnown RBP10.48□□□□□ -0.73
NFKB1-212ENST00000600343 MXI1P50539 228 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 NOP14P78316 857 aaKnown RBP10.48□□□□□ -0.73
NFKB1-212ENST00000600343 KLRC3Q07444 240 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 WASHC5Q12768 1159 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 HNRNPDQ14103 355 aaKnown RBP10.48□□□□□ -0.73
NFKB1-212ENST00000600343 SHROOM1Q2M3G4 852 aaPredicted RBP10.48□□□□□ -0.73
NFKB1-212ENST00000600343 ASTE1Q2TB18 679 aaPredicted RBP10.48□□□□□ -0.73
NFKB1-212ENST00000600343 PPP1R21Q6ZMI0 780 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 CCDC125Q86Z20 511 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 CRACR2BQ8N4Y2 399 aaPredicted RBP10.48□□□□□ -0.73
NFKB1-212ENST00000600343 FBXO25Q8TCJ0 367 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 CDK5RAP3Q96JB5 506 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 PRPF18Q99633 342 aaKnown RBP10.48□□□□□ -0.73
NFKB1-212ENST00000600343 FOXP1Q9H334 677 aaPredicted RBP10.48□□□□□ -0.73
NFKB1-212ENST00000600343 GOLPH3Q9H4A6 298 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 CLEC11AQ9Y240 323 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 PPLO60437 1756 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 TRIM75PA6NK02 468 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 CYTH3O43739 400 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 USP1O94782 785 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 TFAP2AP05549 437 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 SMIM18P0DKX4 95 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 CDH3P22223 829 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 IL9RQ01113 521 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 NDUFA5Q16718 116 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 MMEL1Q495T6 779 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 WDR45BQ5MNZ6 344 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 NEK10Q6ZWH5 1172 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 METTL13Q8N6R0 699 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 WASF1Q92558 559 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 GPATCH1Q9BRR8 931 aaKnown RBP10.48□□□□□ -0.73
NFKB1-212ENST00000600343 RBM38Q9H0Z9 239 aaKnown RBP10.48□□□□□ -0.73
NFKB1-212ENST00000600343 VTA1Q9NP79 307 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 SNX24Q9Y343 169 aa10.48□□□□□ -0.73
NFKB1-212ENST00000600343 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.48□□□□□ -0.73
NFKB1-212ENST00000600343 C4AP0C0L4 1744 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 C4BP0C0L5 1744 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 RIPK2O43353 540 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 FOXN2P32314 431 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 ENTPD1P49961 510 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 DNAJC3Q13217 504 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 MPP2Q14168 576 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 ARHGEF6Q15052 776 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 CNGA3Q16281 694 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 LRRC36Q1X8D7 754 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 SPDYAQ5MJ70 313 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 PPP1R14CQ8TAE6 165 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 TRPC4APQ8TEL6 797 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 KLHL4Q9C0H6 718 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 GID8Q9NWU2 228 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 MTRF1LQ9UGC7 380 aaKnown RBP10.47□□□□□ -0.73
NFKB1-212ENST00000600343 C15orf38-AP3S2A0A0A6YYH1 394 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 STAMBPO95630 424 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 PABPC1P11940 636 aaKnown RBP10.47□□□□□ -0.73
NFKB1-212ENST00000600343 HOXD13P35453 343 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 STT3AP46977 705 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 DR1Q01658 176 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 ACAP1Q15027 740 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 PPP2R5BQ15173 497 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 FYB2Q5VWT5 728 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 ARPINQ7Z6K5 226 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 PDSS2Q86YH6 399 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 IFNLR1Q8IU57 520 aaPredicted RBP10.47□□□□□ -0.73
NFKB1-212ENST00000600343 METTL25Q8N6Q8 603 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 ERP44Q9BS26 406 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.47□□□□□ -0.73
NFKB1-212ENST00000600343 ROPN1BQ9BZX4 212 aaPredicted RBP10.47□□□□□ -0.73
NFKB1-212ENST00000600343 IRF2BPLQ9H1B7 796 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 ROPN1Q9HAT0 212 aaPredicted RBP10.47□□□□□ -0.73
NFKB1-212ENST00000600343 DNAJC17Q9NVM6 304 aaKnown RBP10.47□□□□□ -0.73
NFKB1-212ENST00000600343 ASAP1Q9ULH1 1129 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 CPDO75976 1380 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 MAST3O60307 1309 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 SLC26A4O43511 780 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 ATP6V1B1P15313 513 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 MOGSQ13724 837 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 SLC9C1Q4G0N8 1177 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 MIIPQ5JXC2 388 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 C6orf163Q5TEZ5 329 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 RAPH1Q70E73 1250 aa10.47□□□□□ -0.73
NFKB1-212ENST00000600343 CCDC110Q8TBZ0 833 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms