RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 RNPC3Q96LT9 517 aaKnown RBP20.78■□□□□ 0.92
COPE-209ENST00000599964 MSTO1Q9BUK6 570 aa20.78■□□□□ 0.92
COPE-209ENST00000599964 CCDC94Q9BW85 323 aaPredicted RBP20.78■□□□□ 0.92
COPE-209ENST00000599964 EIF2AQ9BY44 585 aaKnown RBP20.78■□□□□ 0.92
COPE-209ENST00000599964 KCTD10Q9H3F6 313 aa20.78■□□□□ 0.92
COPE-209ENST00000599964 UBN1Q9NPG3 1134 aa20.78■□□□□ 0.92
COPE-209ENST00000599964 ANO10Q9NW15 660 aa20.78■□□□□ 0.92
COPE-209ENST00000599964 TMEM161AQ9NX61 479 aa20.78■□□□□ 0.92
COPE-209ENST00000599964 PCDHB7Q9Y5E2 793 aa20.78■□□□□ 0.92
COPE-209ENST00000599964 A0A0B4J269 797 aa20.77■□□□□ 0.92
COPE-209ENST00000599964 LDHAP00338 332 aaKnown RBP20.77■□□□□ 0.92
COPE-209ENST00000599964 BMP6P22004 513 aa20.77■□□□□ 0.92
COPE-209ENST00000599964 STX1AQ16623 288 aa20.77■□□□□ 0.92
COPE-209ENST00000599964 SLC39A4Q6P5W5 647 aa20.77■□□□□ 0.92
COPE-209ENST00000599964 PHOSPHO2Q8TCD6 241 aa20.77■□□□□ 0.92
COPE-209ENST00000599964 ZBTB45Q96K62 511 aaPredicted RBP20.77■□□□□ 0.92
COPE-209ENST00000599964 SLC9A7Q96T83 725 aa20.77■□□□□ 0.92
COPE-209ENST00000599964 AGPAT3Q9NRZ7 376 aa20.77■□□□□ 0.92
COPE-209ENST00000599964 AGO2Q9UKV8 859 aaKnown RBP20.77■□□□□ 0.92
COPE-209ENST00000599964 TRAF3IP3Q9Y228 551 aa20.77■□□□□ 0.92
COPE-209ENST00000599964 IPPQ9Y573 584 aa20.77■□□□□ 0.92
COPE-209ENST00000599964 BICDL2A1A5D9 508 aa20.76■□□□□ 0.91
COPE-209ENST00000599964 ABLIM1O14639 778 aa20.76■□□□□ 0.91
COPE-209ENST00000599964 OGTO15294 1046 aa20.76■□□□□ 0.91
COPE-209ENST00000599964 TGFB1I1O43294 461 aa20.76■□□□□ 0.91
COPE-209ENST00000599964 HOXA2O43364 376 aa20.76■□□□□ 0.91
COPE-209ENST00000599964 ITGA4P13612 1032 aa20.76■□□□□ 0.91
COPE-209ENST00000599964 IBSPP21815 317 aaPredicted RBP20.76■□□□□ 0.91
COPE-209ENST00000599964 RPL13P26373 211 aaKnown RBP20.76■□□□□ 0.91
COPE-209ENST00000599964 GRM5P41594 1212 aa20.76■□□□□ 0.91
COPE-209ENST00000599964 LRRC63Q05C16 580 aa20.76■□□□□ 0.91
COPE-209ENST00000599964 CT47A1Q5JQC4 288 aaPredicted RBP20.76■□□□□ 0.91
COPE-209ENST00000599964 CENPPQ6IPU0 288 aa20.76■□□□□ 0.91
COPE-209ENST00000599964 KLHL10Q6JEL2 608 aa20.76■□□□□ 0.91
COPE-209ENST00000599964 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.76■□□□□ 0.91
COPE-209ENST00000599964 MRPL10Q7Z7H8 261 aaKnown RBP20.76■□□□□ 0.91
COPE-209ENST00000599964 C12orf56Q8IXR9 622 aa20.76■□□□□ 0.91
COPE-209ENST00000599964 RNF169Q8NCN4 708 aa20.76■□□□□ 0.91
COPE-209ENST00000599964 RSPH1Q8WYR4 309 aa20.76■□□□□ 0.91
COPE-209ENST00000599964 P2RX5Q93086 422 aa20.76■□□□□ 0.91
COPE-209ENST00000599964 KIAA1586Q9HCI6 787 aa20.76■□□□□ 0.91
COPE-209ENST00000599964 TNRC18O15417 2968 aaPredicted RBP20.75■□□□□ 0.91
COPE-209ENST00000599964 PDE4DIPQ5VU43 2346 aa20.75■□□□□ 0.91
COPE-209ENST00000599964 PPP1R3GB7ZBB8 358 aa20.75■□□□□ 0.91
COPE-209ENST00000599964 TISP43B9A030 160 aa20.75■□□□□ 0.91
COPE-209ENST00000599964 CCDC192P0DO97 292 aa20.75■□□□□ 0.91
COPE-209ENST00000599964 CCNE1P24864 410 aa20.75■□□□□ 0.91
COPE-209ENST00000599964 YARSP54577 528 aaKnown RBP20.75■□□□□ 0.91
COPE-209ENST00000599964 PAK1Q13153 545 aa20.75■□□□□ 0.91
COPE-209ENST00000599964 MYBPC2Q14324 1141 aa20.75■□□□□ 0.91
COPE-209ENST00000599964 SHHQ15465 462 aa20.75■□□□□ 0.91
COPE-209ENST00000599964 THNSL1Q8IYQ7 743 aa20.75■□□□□ 0.91
COPE-209ENST00000599964 TOP1MTQ969P6 601 aa20.75■□□□□ 0.91
COPE-209ENST00000599964 IKZF4Q9H2S9 585 aa20.75■□□□□ 0.91
COPE-209ENST00000599964 TOPORSQ9NS56 1045 aaPredicted RBP20.75■□□□□ 0.91
COPE-209ENST00000599964 CEP290O15078 2479 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 CLTAP09496 248 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 ADSSP30520 456 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 NFIL3Q16649 462 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 EDRF1Q3B7T1 1238 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 DPCR1Q3MIW9 517 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 C9orf50Q5SZB4 431 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 RASIP1Q5U651 963 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 ABI1Q8IZP0 508 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 SMG8Q8ND04 991 aaKnown RBP20.74■□□□□ 0.91
COPE-209ENST00000599964 NELFBQ8WX92 580 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 ACAP3Q96P50 834 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 CBWD1Q9BRT8 395 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 ZBED2Q9BTP6 218 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 APOL6Q9BWW8 343 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 SEMA6BQ9H3T3 888 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 NXF3Q9H4D5 531 aaKnown RBP20.74■□□□□ 0.91
COPE-209ENST00000599964 HSPBP1Q9NZL4 362 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 CTNND2Q9UQB3 1225 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 GIT1Q9Y2X7 761 aa20.74■□□□□ 0.91
COPE-209ENST00000599964 SYCE3A1L190 88 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 CLIC2O15247 247 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 UPP2O95045 317 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 NR3C1P04150 777 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 CD44P16070 742 aaKnown RBP20.73■□□□□ 0.91
COPE-209ENST00000599964 ATP2A2P16615 1042 aaKnown RBP20.73■□□□□ 0.91
COPE-209ENST00000599964 CYP2J2P51589 502 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 DEFB103AP81534 67 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 POU5F1Q01860 360 aaKnown RBP20.73■□□□□ 0.91
COPE-209ENST00000599964 TYRO3Q06418 890 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 ZSCAN23Q3MJ62 389 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 FOXR2Q6PJQ5 311 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 GLB1LQ6UWU2 654 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 ZNF598Q86UK7 904 aaKnown RBP20.73■□□□□ 0.91
COPE-209ENST00000599964 SLC9A9Q8IVB4 645 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 GPD1LQ8N335 351 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 XXYLT1Q8NBI6 393 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 TMEM174Q8WUU8 243 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 HAPLN2Q9GZV7 340 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 NAT10Q9H0A0 1025 aaKnown RBP20.73■□□□□ 0.91
COPE-209ENST00000599964 PCIF1Q9H4Z3 704 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 CXXC1Q9P0U4 656 aaPredicted RBP20.73■□□□□ 0.91
COPE-209ENST00000599964 PARP2Q9UGN5 583 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 RWDD2AQ9UIY3 292 aa20.73■□□□□ 0.91
COPE-209ENST00000599964 HES2Q9Y543 173 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms