RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 N4BP3O15049 544 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 NR1I2O75469 434 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 EDN1P05305 212 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 EFNA5P52803 228 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 ZRSR1Q15695 479 aaKnown RBP16.63■□□□□ 0.25
LIG1-215ENST00000597901 TMEM132AQ24JP5 1023 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 NT5DC1Q5TFE4 455 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 ARL6IP4Q66PJ3 421 aaKnown RBP16.63■□□□□ 0.25
LIG1-215ENST00000597901 RINT1Q6NUQ1 792 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 C1orf186Q6ZWK4 172 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 SLC22A17Q8WUG5 538 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 KLHL5Q96PQ7 755 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 PNMA5Q96PV4 448 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 KIFC3Q9BVG8 833 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 COLEC11Q9BWP8 271 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 PHF7Q9BWX1 381 aaPredicted RBP16.63■□□□□ 0.25
LIG1-215ENST00000597901 C11orf16Q9NQ32 467 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 MARCH5Q9NX47 278 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 SNTG2Q9NY99 539 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 RAPGEFL1Q9UHV5 662 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 CCDC169A6NNP5 214 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 LOC730098B7Z3J9 87 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 DCXO43602 365 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 EFEMP2O95967 443 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 SSBP05455 408 aaKnown RBP eCLIP16.62■□□□□ 0.25
LIG1-215ENST00000597901 PEX3P56589 373 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 PTPN14Q15678 1187 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 TPRNQ4KMQ1 711 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 HYIQ5T013 277 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 EEF1DP3Q658K8 133 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 RNF135Q8IUD6 432 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 DAW1Q8N136 415 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 KCTD17Q8N5Z5 321 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 RPGRIP1Q96KN7 1286 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 PLIN2Q99541 437 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 RUSC1Q9BVN2 902 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 ATG2AQ2TAZ0 1938 aa16.62■□□□□ 0.25
LIG1-215ENST00000597901 FAM86C2PA6NEL3 165 aa16.61■□□□□ 0.25
LIG1-215ENST00000597901 SFI1A8K8P3 1242 aa16.61■□□□□ 0.25
LIG1-215ENST00000597901 HIP1RO75146 1068 aa16.61■□□□□ 0.25
LIG1-215ENST00000597901 SOD2P04179 222 aa16.61■□□□□ 0.25
LIG1-215ENST00000597901 CNPP09543 421 aaKnown RBP16.61■□□□□ 0.25
LIG1-215ENST00000597901 EPCAMP16422 314 aa16.61■□□□□ 0.25
LIG1-215ENST00000597901 NPTX2P47972 431 aa16.61■□□□□ 0.25
LIG1-215ENST00000597901 CBX2Q14781 532 aaPredicted RBP16.61■□□□□ 0.25
LIG1-215ENST00000597901 PPFIBP1Q86W92 1011 aa16.61■□□□□ 0.25
LIG1-215ENST00000597901 SYT2Q8N9I0 419 aaPredicted RBP16.61■□□□□ 0.25
LIG1-215ENST00000597901 ADPGKQ9BRR6 497 aa16.61■□□□□ 0.25
LIG1-215ENST00000597901 EMILIN2Q9BXX0 1053 aa16.61■□□□□ 0.25
LIG1-215ENST00000597901 ADAM7Q9H2U9 754 aa16.61■□□□□ 0.25
LIG1-215ENST00000597901 MRPL17Q9NRX2 175 aaKnown RBP16.61■□□□□ 0.25
LIG1-215ENST00000597901 DAXXQ9UER7 740 aaPredicted RBP16.61■□□□□ 0.25
LIG1-215ENST00000597901 PRR33A8MZF0 331 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 F8W810 466 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 KLRC2P26717 231 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 PLA2G5P39877 138 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 ITIH3Q06033 890 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 GRIK3Q13003 919 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 MAPK7Q13164 816 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 ATF7IP2Q5U623 682 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 KIAA0319Q5VV43 1072 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 CES5AQ6NT32 575 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 KANK3Q6NY19 840 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 BRAPQ7Z569 592 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 C12orf76Q8N812 135 aaPredicted RBP16.6■□□□□ 0.25
LIG1-215ENST00000597901 RABGGTAQ92696 567 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 NTPCRQ9BSD7 190 aaKnown RBP16.6■□□□□ 0.25
LIG1-215ENST00000597901 NT5C3AQ9H0P0 336 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 CXCL16Q9H2A7 254 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 TMEM134Q9H6X4 195 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 SSX2IPQ9Y2D8 614 aa16.6■□□□□ 0.25
LIG1-215ENST00000597901 RBM19Q9Y4C8 960 aaKnown RBP16.6■□□□□ 0.25
LIG1-215ENST00000597901 ARIH1Q9Y4X5 557 aaPredicted RBP16.6■□□□□ 0.25
LIG1-215ENST00000597901 C2CD2LO14523 706 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 TADA2AO75478 443 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 PLA2G4BP0C869 781 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 GUCY2CP25092 1073 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 HERC4Q5GLZ8 1057 aaPredicted RBP16.59■□□□□ 0.25
LIG1-215ENST00000597901 CABP7Q86V35 215 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 RNF168Q8IYW5 571 aaPredicted RBP16.59■□□□□ 0.25
LIG1-215ENST00000597901 CDK5RAP3Q96JB5 506 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 AK8Q96MA6 479 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 DRC1Q96MC2 740 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 RPS6KC1Q96S38 1066 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 HERC2P3Q9BVR0 1158 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 TIPINQ9BVW5 301 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 GPR62Q9BZJ7 368 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 C17orf75Q9HAS0 396 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 KMT5AQ9NQR1 393 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 CHST7Q9NS84 486 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 MUTYHQ9UIF7 546 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 KCNG1Q9UIX4 513 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 CDH22Q9UJ99 828 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 TNFSF13BQ9Y275 285 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 ZMYM2Q9UBW7 1377 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 ARID2Q68CP9 1835 aa16.59■□□□□ 0.25
LIG1-215ENST00000597901 PTGESO14684 152 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 RECQL4O94761 1208 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 URODP06132 367 aa16.58■□□□□ 0.24
LIG1-215ENST00000597901 THP07101 528 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms