RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 COL4A6Q14031 1691 aa21.16■□□□□ 0.98
PNKP-207ENST00000596014 CLDN3O15551 220 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 HOXA2O43364 376 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 CA3P07451 260 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 ITGA4P13612 1032 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 STK4Q13043 487 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 AGMOQ6ZNB7 445 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 APBB1IPQ7Z5R6 666 aaPredicted RBP21.15■□□□□ 0.98
PNKP-207ENST00000596014 ZBTB33Q86T24 672 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 ZNF507Q8TCN5 953 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 SP7Q8TDD2 431 aaPredicted RBP21.15■□□□□ 0.98
PNKP-207ENST00000596014 CCDC47Q96A33 483 aaKnown RBP21.15■□□□□ 0.98
PNKP-207ENST00000596014 CDT1Q9H211 546 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 IKZF4Q9H2S9 585 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 ANKFY1Q9P2R3 1169 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 EXOC7Q9UPT5 735 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 EIF3DO15371 548 aaKnown RBP eCLIP21.15■□□□□ 0.98
PNKP-207ENST00000596014 RHOBTB3O94955 611 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 KCNB1Q14721 858 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 SLC39A4Q6P5W5 647 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 HACE1Q8IYU2 909 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 ERCC4Q92889 916 aaPredicted RBP21.15■□□□□ 0.98
PNKP-207ENST00000596014 TIFAQ96CG3 184 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 APOL6Q9BWW8 343 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 NKX2-4Q9H2Z4 354 aa21.15■□□□□ 0.98
PNKP-207ENST00000596014 MYO9BQ13459 2157 aa21.14■□□□□ 0.98
PNKP-207ENST00000596014 CHD7Q9P2D1 2997 aa21.14■□□□□ 0.97
PNKP-207ENST00000596014 CDH23Q9H251 3354 aa21.14■□□□□ 0.97
PNKP-207ENST00000596014 ANKRD63C9JTQ0 380 aa21.14■□□□□ 0.97
PNKP-207ENST00000596014 MCF2P10911 925 aa21.14■□□□□ 0.97
PNKP-207ENST00000596014 HOXD13P35453 343 aa21.14■□□□□ 0.97
PNKP-207ENST00000596014 BTG3Q14201 252 aaPredicted RBP21.14■□□□□ 0.97
PNKP-207ENST00000596014 CMTR2Q8IYT2 770 aaKnown RBP21.14■□□□□ 0.97
PNKP-207ENST00000596014 ABI1Q8IZP0 508 aa21.14■□□□□ 0.97
PNKP-207ENST00000596014 SPATA20Q8TB22 786 aa21.14■□□□□ 0.97
PNKP-207ENST00000596014 HELQQ8TDG4 1101 aa21.14■□□□□ 0.97
PNKP-207ENST00000596014 SCFD1Q8WVM8 642 aa21.14■□□□□ 0.97
PNKP-207ENST00000596014 CASD1Q96PB1 797 aa21.14■□□□□ 0.97
PNKP-207ENST00000596014 HAPLN2Q9GZV7 340 aa21.14■□□□□ 0.97
PNKP-207ENST00000596014 TMEM117Q9H0C3 514 aa21.14■□□□□ 0.97
PNKP-207ENST00000596014 TMEM206Q9H813 350 aa21.14■□□□□ 0.97
PNKP-207ENST00000596014 UBN1Q9NPG3 1134 aa21.14■□□□□ 0.97
PNKP-207ENST00000596014 PCDHA5Q9Y5H7 936 aa21.14■□□□□ 0.97
PNKP-207ENST00000596014 TBKBP1A7MCY6 615 aa21.13■□□□□ 0.97
PNKP-207ENST00000596014 TISP43B9A030 160 aa21.13■□□□□ 0.97
PNKP-207ENST00000596014 OFD1O75665 1012 aa21.13■□□□□ 0.97
PNKP-207ENST00000596014 SMC2O95347 1197 aa21.13■□□□□ 0.97
PNKP-207ENST00000596014 AKAP5P24588 427 aa21.13■□□□□ 0.97
PNKP-207ENST00000596014 MCL1Q07820 350 aa21.13■□□□□ 0.97
PNKP-207ENST00000596014 PAN2Q504Q3 1202 aaKnown RBP21.13■□□□□ 0.97
PNKP-207ENST00000596014 GLB1LQ6UWU2 654 aa21.13■□□□□ 0.97
PNKP-207ENST00000596014 SYCP3Q8IZU3 236 aa21.13■□□□□ 0.97
PNKP-207ENST00000596014 KIAA0895Q8NCT3 520 aa21.13■□□□□ 0.97
PNKP-207ENST00000596014 RSAD1Q9HA92 442 aa21.13■□□□□ 0.97
PNKP-207ENST00000596014 SLC28A3Q9HAS3 691 aa21.13■□□□□ 0.97
PNKP-207ENST00000596014 SNTG2Q9NY99 539 aa21.13■□□□□ 0.97
PNKP-207ENST00000596014 TRIP11Q15643 1979 aa21.13■□□□□ 0.97
PNKP-207ENST00000596014 ARHGEF15O94989 841 aa21.12■□□□□ 0.97
PNKP-207ENST00000596014 MATR3P43243 847 aaKnown RBP eCLIP21.12■□□□□ 0.97
PNKP-207ENST00000596014 NOLC1Q14978 699 aaKnown RBP eCLIP21.12■□□□□ 0.97
PNKP-207ENST00000596014 FIBCD1Q8N539 461 aa21.12■□□□□ 0.97
PNKP-207ENST00000596014 CEP120Q8N960 986 aa21.12■□□□□ 0.97
PNKP-207ENST00000596014 SMARCE1Q969G3 411 aa21.12■□□□□ 0.97
PNKP-207ENST00000596014 GSDMAQ96QA5 445 aa21.12■□□□□ 0.97
PNKP-207ENST00000596014 GIT1Q9Y2X7 761 aa21.12■□□□□ 0.97
PNKP-207ENST00000596014 STYXL1Q9Y6J8 313 aa21.12■□□□□ 0.97
PNKP-207ENST00000596014 UBE4BO95155 1302 aa21.12■□□□□ 0.97
PNKP-207ENST00000596014 A0A0B4J269 797 aa21.12■□□□□ 0.97
PNKP-207ENST00000596014 LINC01553A4QN01 128 aa21.12■□□□□ 0.97
PNKP-207ENST00000596014 HARSP12081 509 aaKnown RBP21.12■□□□□ 0.97
PNKP-207ENST00000596014 BMT2Q1RMZ1 405 aa21.12■□□□□ 0.97
PNKP-207ENST00000596014 RMND1Q9NWS8 449 aa21.12■□□□□ 0.97
PNKP-207ENST00000596014 PARP2Q9UGN5 583 aa21.12■□□□□ 0.97
PNKP-207ENST00000596014 GDAQ9Y2T3 454 aa21.12■□□□□ 0.97
PNKP-207ENST00000596014 CITO14578 2027 aa21.11■□□□□ 0.97
PNKP-207ENST00000596014 GRM5P41594 1212 aa21.11■□□□□ 0.97
PNKP-207ENST00000596014 FXR1P51114 621 aaKnown RBP eCLIP21.11■□□□□ 0.97
PNKP-207ENST00000596014 AFF1P51825 1210 aaKnown RBP21.11■□□□□ 0.97
PNKP-207ENST00000596014 TAP1Q03518 808 aa21.11■□□□□ 0.97
PNKP-207ENST00000596014 CAMK4Q16566 473 aa21.11■□□□□ 0.97
PNKP-207ENST00000596014 PPP2R2DQ66LE6 453 aa21.11■□□□□ 0.97
PNKP-207ENST00000596014 SLFN12LQ6IEE8 588 aa21.11■□□□□ 0.97
PNKP-207ENST00000596014 THNSL1Q8IYQ7 743 aa21.11■□□□□ 0.97
PNKP-207ENST00000596014 GPT2Q8TD30 523 aa21.11■□□□□ 0.97
PNKP-207ENST00000596014 RSPH1Q8WYR4 309 aa21.11■□□□□ 0.97
PNKP-207ENST00000596014 GAD1Q99259 594 aa21.11■□□□□ 0.97
PNKP-207ENST00000596014 GZF1Q9H116 711 aaPredicted RBP21.11■□□□□ 0.97
PNKP-207ENST00000596014 INPP5FQ9Y2H2 1132 aa21.11■□□□□ 0.97
PNKP-207ENST00000596014 ARL5CA6NH57 179 aa21.1■□□□□ 0.97
PNKP-207ENST00000596014 ADSSP30520 456 aa21.1■□□□□ 0.97
PNKP-207ENST00000596014 OSTNP61366 133 aa21.1■□□□□ 0.97
PNKP-207ENST00000596014 KLHL40Q2TBA0 621 aa21.1■□□□□ 0.97
PNKP-207ENST00000596014 NOMO2Q5JPE7 1267 aa21.1■□□□□ 0.97
PNKP-207ENST00000596014 LRRC55Q6ZSA7 311 aa21.1■□□□□ 0.97
PNKP-207ENST00000596014 NELFCDQ8IXH7 590 aa21.1■□□□□ 0.97
PNKP-207ENST00000596014 TMEM192Q8IY95 271 aa21.1■□□□□ 0.97
PNKP-207ENST00000596014 ZFP42Q96MM3 310 aa21.1■□□□□ 0.97
PNKP-207ENST00000596014 MSTO1Q9BUK6 570 aa21.1■□□□□ 0.97
PNKP-207ENST00000596014 CCDC94Q9BW85 323 aaPredicted RBP21.1■□□□□ 0.97
PNKP-207ENST00000596014 TYW1Q9NV66 732 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms