RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 SKIP12755 728 aa24.66■■□□□ 1.54
SNRNP70-204ENST00000595231 KCNJ6P48051 423 aa24.66■■□□□ 1.54
SNRNP70-204ENST00000595231 NOLC1Q14978 699 aaKnown RBP eCLIP24.66■■□□□ 1.54
SNRNP70-204ENST00000595231 DCAF4L1Q3SXM0 396 aa24.66■■□□□ 1.54
SNRNP70-204ENST00000595231 SLFN12LQ6IEE8 588 aa24.66■■□□□ 1.54
SNRNP70-204ENST00000595231 CEP120Q8N960 986 aa24.66■■□□□ 1.54
SNRNP70-204ENST00000595231 RNPC3Q96LT9 517 aaKnown RBP24.66■■□□□ 1.54
SNRNP70-204ENST00000595231 TRIM6Q9C030 488 aaPredicted RBP24.66■■□□□ 1.54
SNRNP70-204ENST00000595231 MTIF3Q9H2K0 278 aaKnown RBP24.66■■□□□ 1.54
SNRNP70-204ENST00000595231 RNF39Q9H2S5 420 aa24.66■■□□□ 1.54
SNRNP70-204ENST00000595231 AGPAT3Q9NRZ7 376 aa24.66■■□□□ 1.54
SNRNP70-204ENST00000595231 TMEM161AQ9NX61 479 aa24.66■■□□□ 1.54
SNRNP70-204ENST00000595231 SLC4A7Q9Y6M7 1214 aa24.66■■□□□ 1.54
SNRNP70-204ENST00000595231 MEIS3P2A8K0S8 358 aa24.65■■□□□ 1.54
SNRNP70-204ENST00000595231 FAM189A1O60320 539 aa24.65■■□□□ 1.54
SNRNP70-204ENST00000595231 EOMESO95936 686 aa24.65■■□□□ 1.54
SNRNP70-204ENST00000595231 CBWD1Q9BRT8 395 aa24.65■■□□□ 1.54
SNRNP70-204ENST00000595231 SEMA6BQ9H3T3 888 aa24.65■■□□□ 1.54
SNRNP70-204ENST00000595231 PDXKO00764 312 aa24.64■■□□□ 1.53
SNRNP70-204ENST00000595231 IBSPP21815 317 aaPredicted RBP24.64■■□□□ 1.53
SNRNP70-204ENST00000595231 SNRPFP62306 86 aaKnown RBP24.64■■□□□ 1.53
SNRNP70-204ENST00000595231 NPAS4Q8IUM7 802 aa24.64■■□□□ 1.53
SNRNP70-204ENST00000595231 PHOSPHO2Q8TCD6 241 aa24.64■■□□□ 1.53
SNRNP70-204ENST00000595231 POMGNT1Q8WZA1 660 aa24.64■■□□□ 1.53
SNRNP70-204ENST00000595231 LPPQ93052 612 aa24.64■■□□□ 1.53
SNRNP70-204ENST00000595231 TYW1Q9NV66 732 aaKnown RBP24.64■■□□□ 1.53
SNRNP70-204ENST00000595231 TRAF3IP3Q9Y228 551 aa24.64■■□□□ 1.53
SNRNP70-204ENST00000595231 PCDHB7Q9Y5E2 793 aa24.64■■□□□ 1.53
SNRNP70-204ENST00000595231 GARTP22102 1010 aa24.63■■□□□ 1.53
SNRNP70-204ENST00000595231 NLRP12P59046 1061 aa24.63■■□□□ 1.53
SNRNP70-204ENST00000595231 ZCWPW2Q504Y3 356 aa24.63■■□□□ 1.53
SNRNP70-204ENST00000595231 CENPPQ6IPU0 288 aa24.63■■□□□ 1.53
SNRNP70-204ENST00000595231 AGMOQ6ZNB7 445 aa24.63■■□□□ 1.53
SNRNP70-204ENST00000595231 TDHQ8IZJ6 230 aa24.63■■□□□ 1.53
SNRNP70-204ENST00000595231 CLIC2O15247 247 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 UPP2O95045 317 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 HARSP12081 509 aaKnown RBP24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 MATR3P43243 847 aaKnown RBP eCLIP24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 DPCR1Q3MIW9 517 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 SEZ6Q53EL9 994 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 HS2ST1Q7LGA3 356 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 APBB1IPQ7Z5R6 666 aaPredicted RBP24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 TMEM192Q8IY95 271 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 THNSL1Q8IYQ7 743 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 RNF169Q8NCN4 708 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 ZSWIM2Q8NEG5 633 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 SLC9A7Q96T83 725 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 MSTO1Q9BUK6 570 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 RNF19AQ9NV58 838 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 SNTG2Q9NY99 539 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 CGNQ9P2M7 1197 aaKnown RBP24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 AGO2Q9UKV8 859 aaKnown RBP24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 OGTO15294 1046 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 ATP2A2P16615 1042 aaKnown RBP24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 PPP1R2P41236 205 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 GRM5P41594 1212 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 PMS1P54277 932 aaKnown RBP24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 ZBTB41Q5SVQ8 909 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 ARMCX5Q6P1M9 558 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 C12orf56Q8IXR9 622 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 MLKLQ8NB16 471 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 TMEM174Q8WUU8 243 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 DHTKD1Q96HY7 919 aaPredicted RBP24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 PCIF1Q9H4Z3 704 aa24.62■■□□□ 1.53
SNRNP70-204ENST00000595231 GJB5O95377 273 aa24.61■■□□□ 1.53
SNRNP70-204ENST00000595231 STAG3L1P0CL83 205 aa24.61■■□□□ 1.53
SNRNP70-204ENST00000595231 FGFR1P11362 822 aa24.61■■□□□ 1.53
SNRNP70-204ENST00000595231 AKAP5P24588 427 aa24.61■■□□□ 1.53
SNRNP70-204ENST00000595231 OSTNP61366 133 aa24.61■■□□□ 1.53
SNRNP70-204ENST00000595231 STIM1Q13586 685 aa24.61■■□□□ 1.53
SNRNP70-204ENST00000595231 FAM109BQ6ICB4 259 aaPredicted RBP24.61■■□□□ 1.53
SNRNP70-204ENST00000595231 HERC6Q8IVU3 1022 aa24.61■■□□□ 1.53
SNRNP70-204ENST00000595231 GOLGA5Q8TBA6 731 aa24.61■■□□□ 1.53
SNRNP70-204ENST00000595231 PGBD4Q96DM1 585 aa24.61■■□□□ 1.53
SNRNP70-204ENST00000595231 LRFN2Q9ULH4 789 aa24.61■■□□□ 1.53
SNRNP70-204ENST00000595231 PSMA7O14818 248 aa24.6■■□□□ 1.53
SNRNP70-204ENST00000595231 DGKIO75912 1065 aa24.6■■□□□ 1.53
SNRNP70-204ENST00000595231 ITGA4P13612 1032 aa24.6■■□□□ 1.53
SNRNP70-204ENST00000595231 TNFSF9P41273 254 aa24.6■■□□□ 1.53
SNRNP70-204ENST00000595231 CLLU1OSQ5K130 101 aa24.6■■□□□ 1.53
SNRNP70-204ENST00000595231 PRPF38BQ5VTL8 546 aaKnown RBP24.6■■□□□ 1.53
SNRNP70-204ENST00000595231 FAM117BQ6P1L5 589 aa24.6■■□□□ 1.53
SNRNP70-204ENST00000595231 SASS6Q6UVJ0 657 aa24.6■■□□□ 1.53
SNRNP70-204ENST00000595231 CRELD2Q6UXH1 353 aaPredicted RBP24.6■■□□□ 1.53
SNRNP70-204ENST00000595231 APOL6Q9BWW8 343 aa24.6■■□□□ 1.53
SNRNP70-204ENST00000595231 DMAC2Q9NW81 257 aa24.6■■□□□ 1.53
SNRNP70-204ENST00000595231 RNF216Q9NWF9 866 aaPredicted RBP24.6■■□□□ 1.53
SNRNP70-204ENST00000595231 HSPBP1Q9NZL4 362 aa24.6■■□□□ 1.53
SNRNP70-204ENST00000595231 MEFVO15553 781 aaPredicted RBP24.59■■□□□ 1.53
SNRNP70-204ENST00000595231 LETM1O95202 739 aaPredicted RBP24.59■■□□□ 1.53
SNRNP70-204ENST00000595231 CCNE1P24864 410 aa24.59■■□□□ 1.53
SNRNP70-204ENST00000595231 ACOT2P49753 483 aa24.59■■□□□ 1.53
SNRNP70-204ENST00000595231 ANKRD40Q6AI12 368 aa24.59■■□□□ 1.53
SNRNP70-204ENST00000595231 KLHL10Q6JEL2 608 aa24.59■■□□□ 1.53
SNRNP70-204ENST00000595231 P2RX5Q93086 422 aa24.59■■□□□ 1.53
SNRNP70-204ENST00000595231 SAAL1Q96ER3 474 aa24.59■■□□□ 1.53
SNRNP70-204ENST00000595231 RC3H2Q9HBD1 1191 aaKnown RBP24.59■■□□□ 1.53
SNRNP70-204ENST00000595231 CPSF3Q9UKF6 684 aaKnown RBP24.59■■□□□ 1.53
SNRNP70-204ENST00000595231 COLQQ9Y215 455 aaPredicted RBP24.59■■□□□ 1.53
SNRNP70-204ENST00000595231 COL4A6Q14031 1691 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms