RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 BCAR1P56945 870 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 ZNF568Q3ZCX4 644 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 TIGD5Q53EQ6 642 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 ADALQ6DHV7 355 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 HAUS6Q7Z4H7 955 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 SFR1Q86XK3 245 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 IQUBQ8NA54 791 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 SPPL3Q8TCT6 385 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 ZFP42Q96MM3 310 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 CDT1Q9H211 546 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 TNMDQ9H2S6 317 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 PTPRHQ9HD43 1115 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 KBTBD4Q9NVX7 518 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 SNTG2Q9NY99 539 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 PARP2Q9UGN5 583 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 TDRD15B5MCY1 1934 aaKnown RBP15.98■□□□□ 0.15
VRK3-206ENST00000594090 PRRC2BQ5JSZ5 2229 aaKnown RBP15.98■□□□□ 0.15
VRK3-206ENST00000594090 ABLIM1O14639 778 aa15.98■□□□□ 0.15
VRK3-206ENST00000594090 B4GALT3O60512 393 aa15.98■□□□□ 0.15
VRK3-206ENST00000594090 RECQL4O94761 1208 aa15.98■□□□□ 0.15
VRK3-206ENST00000594090 CSPG5O95196 566 aa15.98■□□□□ 0.15
VRK3-206ENST00000594090 PROZP22891 400 aa15.98■□□□□ 0.15
VRK3-206ENST00000594090 DNAJB1P25685 340 aa15.98■□□□□ 0.15
VRK3-206ENST00000594090 SCNN1GP51170 649 aa15.98■□□□□ 0.15
VRK3-206ENST00000594090 MPZL3Q6UWV2 235 aa15.98■□□□□ 0.15
VRK3-206ENST00000594090 APBB1IPQ7Z5R6 666 aaPredicted RBP15.98■□□□□ 0.15
VRK3-206ENST00000594090 ZNF280BQ86YH2 543 aa15.98■□□□□ 0.15
VRK3-206ENST00000594090 POF1BQ8WVV4 589 aa15.98■□□□□ 0.15
VRK3-206ENST00000594090 STAMQ92783 540 aa15.98■□□□□ 0.15
VRK3-206ENST00000594090 GBP3Q9H0R5 595 aa15.98■□□□□ 0.15
VRK3-206ENST00000594090 KLK14Q9P0G3 267 aa15.98■□□□□ 0.15
VRK3-206ENST00000594090 FRMD3A2A2Y4 597 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 TOM1L1O75674 476 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 GAP43P17677 238 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 NMT1P30419 496 aaKnown RBP15.97■□□□□ 0.15
VRK3-206ENST00000594090 ABCD1P33897 745 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 ALDH7A1P49419 539 aaKnown RBP15.97■□□□□ 0.15
VRK3-206ENST00000594090 PLCB3Q01970 1234 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 UBE3AQ05086 875 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 CAMK1Q14012 370 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 ZPBP2Q6X784 338 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 SLC39A11Q8N1S5 342 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 GSTCDQ8NEC7 633 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 BICD1Q96G01 975 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 RPS6KC1Q96S38 1066 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 PYM1Q9BRP8 204 aaKnown RBP15.97■□□□□ 0.15
VRK3-206ENST00000594090 MAGEF1Q9HAY2 307 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 MIOSQ9NXC5 875 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 SPG21Q9NZD8 308 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 SEL1LQ9UBV2 794 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 DNAJB4Q9UDY4 337 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 TBX20Q9UMR3 447 aa15.97■□□□□ 0.15
VRK3-206ENST00000594090 CARNS1A5YM72 827 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 NT5C1B-RDH14C9J2C7 533 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 DDHD2O94830 711 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 GALTP07902 379 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 IDEP14735 1019 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 PFKFB1P16118 471 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 CMA1P23946 247 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 ANP32AP39687 249 aaKnown RBP15.96■□□□□ 0.15
VRK3-206ENST00000594090 GTF2BQ00403 316 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 AMPD3Q01432 767 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 GRIK3Q13003 919 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 ZBTB33Q86T24 672 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 TMEM173Q86WV6 379 aaPredicted RBP15.96■□□□□ 0.15
VRK3-206ENST00000594090 MAP4K3Q8IVH8 894 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 CEP120Q8N960 986 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 SLC17A8Q8NDX2 589 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 MRPS27Q92552 414 aaKnown RBP15.96■□□□□ 0.15
VRK3-206ENST00000594090 ZBTB45Q96K62 511 aaPredicted RBP15.96■□□□□ 0.15
VRK3-206ENST00000594090 FAM193BQ96PV7 902 aaPredicted RBP15.96■□□□□ 0.15
VRK3-206ENST00000594090 TMEM175Q9BSA9 504 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 LRRC27Q9C0I9 530 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 ST6GALNAC4Q9H4F1 302 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 NSUN3Q9H649 340 aaKnown RBP15.96■□□□□ 0.15
VRK3-206ENST00000594090 GDPD2Q9HCC8 539 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 PANK4Q9NVE7 773 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 ANKFY1Q9P2R3 1169 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 KCNH3Q9ULD8 1083 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 LZTS1Q9Y250 596 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 GDAQ9Y2T3 454 aa15.96■□□□□ 0.15
VRK3-206ENST00000594090 A0A1B0GVL5 298 aa15.95■□□□□ 0.14
VRK3-206ENST00000594090 PPP1R37O75864 691 aa15.95■□□□□ 0.14
VRK3-206ENST00000594090 PIGRP01833 764 aa15.95■□□□□ 0.14
VRK3-206ENST00000594090 MCF2P10911 925 aa15.95■□□□□ 0.14
VRK3-206ENST00000594090 GRM5P41594 1212 aa15.95■□□□□ 0.14
VRK3-206ENST00000594090 SLC11A1P49279 550 aa15.95■□□□□ 0.14
VRK3-206ENST00000594090 DSC1Q08554 894 aa15.95■□□□□ 0.14
VRK3-206ENST00000594090 NOLC1Q14978 699 aaKnown RBP eCLIP15.95■□□□□ 0.14
VRK3-206ENST00000594090 SKIV2LQ15477 1246 aaKnown RBP15.95■□□□□ 0.14
VRK3-206ENST00000594090 COLGALT2Q8IYK4 626 aa15.95■□□□□ 0.14
VRK3-206ENST00000594090 TCHPQ9BT92 498 aa15.95■□□□□ 0.14
VRK3-206ENST00000594090 TRIM9Q9C026 710 aa15.95■□□□□ 0.14
VRK3-206ENST00000594090 MRPL44Q9H9J2 332 aaKnown RBP15.95■□□□□ 0.14
VRK3-206ENST00000594090 TLR9Q9NR96 1032 aa15.95■□□□□ 0.14
VRK3-206ENST00000594090 OLFML3Q9NRN5 406 aa15.95■□□□□ 0.14
VRK3-206ENST00000594090 HPSEQ9Y251 543 aa15.95■□□□□ 0.14
VRK3-206ENST00000594090 PTGESO14684 152 aa15.94■□□□□ 0.14
VRK3-206ENST00000594090 HNRNPDLO14979 420 aaKnown RBP15.94■□□□□ 0.14
VRK3-206ENST00000594090 ACTN4O43707 911 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms