RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 IPPQ9Y573 584 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 CHD9Q3L8U1 2897 aa21.5■■□□□ 1.03
LSM4-203ENST00000593829 FRMD3A2A2Y4 597 aa21.5■■□□□ 1.03
LSM4-203ENST00000593829 ACTN4O43707 911 aaKnown RBP21.5■■□□□ 1.03
LSM4-203ENST00000593829 NPTXRO95502 500 aa21.5■■□□□ 1.03
LSM4-203ENST00000593829 ABCD1P33897 745 aa21.5■■□□□ 1.03
LSM4-203ENST00000593829 LONRF3Q496Y0 759 aa21.5■■□□□ 1.03
LSM4-203ENST00000593829 CNNM4Q6P4Q7 775 aa21.5■■□□□ 1.03
LSM4-203ENST00000593829 CCDC65Q8IXS2 484 aa21.5■■□□□ 1.03
LSM4-203ENST00000593829 SMG8Q8ND04 991 aaKnown RBP21.5■■□□□ 1.03
LSM4-203ENST00000593829 FIZ1Q96SL8 496 aa21.5■■□□□ 1.03
LSM4-203ENST00000593829 GOLPH3LQ9H4A5 285 aa21.5■■□□□ 1.03
LSM4-203ENST00000593829 PANK4Q9NVE7 773 aa21.5■■□□□ 1.03
LSM4-203ENST00000593829 AFMP43652 599 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 ERVK-21P61565 698 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 HERC4Q5GLZ8 1057 aaPredicted RBP21.49■■□□□ 1.03
LSM4-203ENST00000593829 CLLU1OSQ5K130 101 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 HACE1Q8IYU2 909 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 FAM200AQ8TCP9 573 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 CASD1Q96PB1 797 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 ACO2Q99798 780 aaKnown RBP21.49■■□□□ 1.03
LSM4-203ENST00000593829 TNFSF13BQ9Y275 285 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 AP5Z1O43299 807 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 ITGA4P13612 1032 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 NMT1P30419 496 aaKnown RBP21.49■■□□□ 1.03
LSM4-203ENST00000593829 ASIC1P78348 528 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 GRIN2CQ14957 1233 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 GLB1LQ6UWU2 654 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 APBB1IPQ7Z5R6 666 aaPredicted RBP21.49■■□□□ 1.03
LSM4-203ENST00000593829 HELQQ8TDG4 1101 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 RSPH1Q8WYR4 309 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 TARS2Q9BW92 718 aaKnown RBP21.49■■□□□ 1.03
LSM4-203ENST00000593829 KCNF1Q9H3M0 494 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 ST6GALNAC4Q9H4F1 302 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 CERS4Q9HA82 394 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 UBN1Q9NPG3 1134 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 MTMR10Q9NXD2 777 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 TBX20Q9UMR3 447 aa21.49■■□□□ 1.03
LSM4-203ENST00000593829 MEIS3P2A8K0S8 358 aa21.48■■□□□ 1.03
LSM4-203ENST00000593829 GTF2BQ00403 316 aa21.48■■□□□ 1.03
LSM4-203ENST00000593829 EEF1DP3Q658K8 133 aa21.48■■□□□ 1.03
LSM4-203ENST00000593829 AGMOQ6ZNB7 445 aa21.48■■□□□ 1.03
LSM4-203ENST00000593829 SPRED2Q7Z698 418 aa21.48■■□□□ 1.03
LSM4-203ENST00000593829 PAGE5Q96GU1 130 aa21.48■■□□□ 1.03
LSM4-203ENST00000593829 SAMD11Q96NU1 681 aa21.48■■□□□ 1.03
LSM4-203ENST00000593829 MRPL44Q9H9J2 332 aaKnown RBP21.48■■□□□ 1.03
LSM4-203ENST00000593829 OLFML3Q9NRN5 406 aa21.48■■□□□ 1.03
LSM4-203ENST00000593829 MRPL42Q9Y6G3 142 aaKnown RBP21.48■■□□□ 1.03
LSM4-203ENST00000593829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.47■■□□□ 1.03
LSM4-203ENST00000593829 DCAF4L1Q3SXM0 396 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 ZNF720Q7Z2F6 126 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 ARNTL2Q8WYA1 636 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 CLP1Q92989 425 aaKnown RBP21.47■■□□□ 1.03
LSM4-203ENST00000593829 C17orf80Q9BSJ5 609 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 NXF3Q9H4D5 531 aaKnown RBP21.47■■□□□ 1.03
LSM4-203ENST00000593829 RSAD1Q9HA92 442 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 MTUS1Q9ULD2 1270 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 RWDD3Q9Y3V2 267 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 HES2Q9Y543 173 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 ZNF202O95125 648 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 ZPBP2Q6X784 338 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 RBM43Q6ZSC3 357 aaKnown RBP21.47■■□□□ 1.03
LSM4-203ENST00000593829 TMEM192Q8IY95 271 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 GRAMD1CQ8IYS0 662 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 MRPL9Q9BYD2 267 aaKnown RBP21.47■■□□□ 1.03
LSM4-203ENST00000593829 BLZF1Q9H2G9 400 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 RNF39Q9H2S5 420 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 PTPRHQ9HD43 1115 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 TBC1D7Q9P0N9 293 aa21.47■■□□□ 1.03
LSM4-203ENST00000593829 COASYQ13057 564 aa21.46■■□□□ 1.03
LSM4-203ENST00000593829 LRRC43Q8N309 656 aa21.46■■□□□ 1.03
LSM4-203ENST00000593829 BICD1Q96G01 975 aa21.46■■□□□ 1.03
LSM4-203ENST00000593829 TCHPQ9BT92 498 aa21.46■■□□□ 1.03
LSM4-203ENST00000593829 APOL6Q9BWW8 343 aa21.46■■□□□ 1.03
LSM4-203ENST00000593829 TYW1Q9NV66 732 aaKnown RBP21.46■■□□□ 1.03
LSM4-203ENST00000593829 FNDC1Q4ZHG4 1894 aaPredicted RBP21.46■■□□□ 1.03
LSM4-203ENST00000593829 TOM1L1O75674 476 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 LINC00271P0C7V0 271 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 CASP1P29466 404 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 CUL4BQ13620 913 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 EPC2Q52LR7 807 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 ZC2HC1CQ53FD0 456 aaPredicted RBP21.45■■□□□ 1.02
LSM4-203ENST00000593829 NOMO2Q5JPE7 1267 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 UNC13DQ70J99 1090 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 HVCN1Q96D96 273 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 PRDM12Q9H4Q4 367 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 INPP5FQ9Y2H2 1132 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 CTIFO43310 598 aaKnown RBP21.45■■□□□ 1.02
LSM4-203ENST00000593829 PROZP22891 400 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 BMPR1AP36894 532 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 ZNF568Q3ZCX4 644 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 SPOUT1Q5T280 376 aaKnown RBP21.45■■□□□ 1.02
LSM4-203ENST00000593829 MPZL3Q6UWV2 235 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 KRBA2Q6ZNG9 492 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 MAP4K3Q8IVH8 894 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 URGCPQ8TCY9 931 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 GUCD1Q96NT3 240 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 CDX2Q99626 313 aaPredicted RBP21.45■■□□□ 1.02
LSM4-203ENST00000593829 NUP62CLQ9H1M0 184 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 PARP2Q9UGN5 583 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms