RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 FAM89AQ96GI7 184 aa6.45□□□□□ -1.38
SMAD4-216ENST00000593223 ZNF512Q96ME7 567 aaPredicted RBP6.45□□□□□ -1.38
SMAD4-216ENST00000593223 MPHOSPH9Q99550 1183 aa6.45□□□□□ -1.38
SMAD4-216ENST00000593223 GPRC5DQ9NZD1 345 aa6.45□□□□□ -1.38
SMAD4-216ENST00000593223 SAP30BPQ9UHR5 308 aaKnown RBP6.45□□□□□ -1.38
SMAD4-216ENST00000593223 CAPN14A8MX76 684 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 B8ZZF3 427 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 PCDHGA12O60330 932 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 NDUFS2O75306 463 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 ITGA10O75578 1167 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 ACO1P21399 889 aaKnown RBP6.44□□□□□ -1.38
SMAD4-216ENST00000593223 MCAMP43121 646 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 MAGEA10P43363 369 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-216ENST00000593223 SLC16A1P53985 500 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 ELAVL1Q15717 326 aaKnown RBP6.44□□□□□ -1.38
SMAD4-216ENST00000593223 SPATS1Q496A3 300 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 GJC2Q5T442 439 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-216ENST00000593223 MFSD5Q6N075 450 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 PRRT2Q7Z6L0 340 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-216ENST00000593223 STAG1Q8WVM7 1258 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 IL17RAQ96F46 866 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 TEKT5Q96M29 485 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 ADOQ96SZ5 270 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 CD248Q9HCU0 757 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 AASDHPPTQ9NRN7 309 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 SH3BP1Q9Y3L3 701 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 PCDHGA9Q9Y5G4 932 aaKnown RBP6.44□□□□□ -1.38
SMAD4-216ENST00000593223 PCDHGA8Q9Y5G5 932 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 PCDHGA7Q9Y5G6 932 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 PCDHGA6Q9Y5G7 932 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 PCDHGA3Q9Y5H0 932 aa6.44□□□□□ -1.38
SMAD4-216ENST00000593223 FZD9O00144 591 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 STC2O76061 302 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 GASTP01350 101 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 GNAT2P19087 354 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 C5AR1P21730 350 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 PTPN7P35236 360 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 GZMKP49863 264 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 SELENOPP49908 381 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 APBA1Q02410 837 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 FAM214AQ32MH5 1076 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 PDZD4Q76G19 769 aaPredicted RBP6.43□□□□□ -1.38
SMAD4-216ENST00000593223 PALM2Q8IXS6 379 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 GSPT2Q8IYD1 628 aaKnown RBP6.43□□□□□ -1.38
SMAD4-216ENST00000593223 MDM1Q8TC05 714 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 CHMP4CQ96CF2 233 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 SLC13A1Q9BZW2 595 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 KLC2Q9H0B6 622 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 SCOCQ9UIL1 159 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 INTUQ9ULD6 942 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 HDAC5Q9UQL6 1122 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 SYNJ1O43426 1573 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 PEG3Q9GZU2 1588 aa6.43□□□□□ -1.38
SMAD4-216ENST00000593223 MUSKO15146 869 aa6.42□□□□□ -1.38
SMAD4-216ENST00000593223 PPM1GO15355 546 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-216ENST00000593223 HOXA3O43365 443 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-216ENST00000593223 MFAP3LO75121 409 aa6.42□□□□□ -1.38
SMAD4-216ENST00000593223 ALDH1L1O75891 902 aa6.42□□□□□ -1.38
SMAD4-216ENST00000593223 HIBADHP31937 336 aaKnown RBP6.42□□□□□ -1.38
SMAD4-216ENST00000593223 CRHR1P34998 444 aa6.42□□□□□ -1.38
SMAD4-216ENST00000593223 RECQLP46063 649 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-216ENST00000593223 NEK2P51955 445 aa6.42□□□□□ -1.38
SMAD4-216ENST00000593223 KRT85P78386 507 aa6.42□□□□□ -1.38
SMAD4-216ENST00000593223 KIF23Q02241 960 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-216ENST00000593223 EFEMP1Q12805 493 aa6.42□□□□□ -1.38
SMAD4-216ENST00000593223 MST1LQ2TV78 715 aa6.42□□□□□ -1.38
SMAD4-216ENST00000593223 THEMISQ8N1K5 641 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-216ENST00000593223 ANKRD35Q8N283 1001 aa6.42□□□□□ -1.38
SMAD4-216ENST00000593223 ZNF808Q8N4W9 903 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-216ENST00000593223 NRG4Q8WWG1 115 aa6.42□□□□□ -1.38
SMAD4-216ENST00000593223 DVL3Q92997 716 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-216ENST00000593223 WWC2-AS2Q96NR7 200 aa6.42□□□□□ -1.38
SMAD4-216ENST00000593223 CDK5RAP1Q96SZ6 601 aaKnown RBP6.42□□□□□ -1.38
SMAD4-216ENST00000593223 LUC7L2Q9Y383 392 aaKnown RBP6.42□□□□□ -1.38
SMAD4-216ENST00000593223 TSPOAP1O95153 1857 aa6.42□□□□□ -1.38
SMAD4-216ENST00000593223 FAM171A2A8MVW0 826 aa6.41□□□□□ -1.38
SMAD4-216ENST00000593223 CYP27B1O15528 508 aa6.41□□□□□ -1.38
SMAD4-216ENST00000593223 IPO13O94829 963 aaKnown RBP6.41□□□□□ -1.38
SMAD4-216ENST00000593223 ENDOD1O94919 500 aa6.41□□□□□ -1.38
SMAD4-216ENST00000593223 PPP3CAQ08209 521 aa6.41□□□□□ -1.38
SMAD4-216ENST00000593223 MRPL49Q13405 166 aaKnown RBP6.41□□□□□ -1.38
SMAD4-216ENST00000593223 ODF1Q14990 250 aa6.41□□□□□ -1.38
SMAD4-216ENST00000593223 PRKD1Q15139 912 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-216ENST00000593223 ELOA2Q8IYF1 753 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-216ENST00000593223 PQLC1Q8N2U9 271 aa6.41□□□□□ -1.38
SMAD4-216ENST00000593223 MB21D1Q8N884 522 aa6.41□□□□□ -1.38
SMAD4-216ENST00000593223 OR7D4Q8NG98 312 aa6.41□□□□□ -1.38
SMAD4-216ENST00000593223 DPF2Q92785 391 aa6.41□□□□□ -1.38
SMAD4-216ENST00000593223 MIEF2Q96C03 454 aa6.41□□□□□ -1.38
SMAD4-216ENST00000593223 C7orf25Q9BPX7 421 aa6.41□□□□□ -1.38
SMAD4-216ENST00000593223 CPPED1Q9BRF8 314 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-216ENST00000593223 ENKD1Q9H0I2 346 aa6.41□□□□□ -1.38
SMAD4-216ENST00000593223 BCO1Q9HAY6 547 aa6.41□□□□□ -1.38
SMAD4-216ENST00000593223 TRPS1Q9UHF7 1281 aa6.41□□□□□ -1.38
SMAD4-216ENST00000593223 TUBD1Q9UJT1 453 aa6.41□□□□□ -1.38
SMAD4-216ENST00000593223 ADCY6O43306 1168 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 CT47B1P0C2W7 299 aaPredicted RBP6.4□□□□□ -1.38
SMAD4-216ENST00000593223 ZNF20P17024 532 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 ADAM17P78536 824 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 MGAT2Q10469 447 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms