RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 IGFBP6P24592 240 aaPredicted RBP12.48□□□□□ -0.41
PRKCSH-220ENST00000593104 RFC5P40937 340 aa12.48□□□□□ -0.41
PRKCSH-220ENST00000593104 PTENP60484 403 aa12.48□□□□□ -0.41
PRKCSH-220ENST00000593104 DSG1Q02413 1049 aa12.48□□□□□ -0.41
PRKCSH-220ENST00000593104 EPHA7Q15375 998 aa12.48□□□□□ -0.41
PRKCSH-220ENST00000593104 FUT10Q6P4F1 479 aa12.48□□□□□ -0.41
PRKCSH-220ENST00000593104 C4orf19Q8IY42 314 aa12.48□□□□□ -0.41
PRKCSH-220ENST00000593104 KCNG4Q8TDN1 519 aa12.48□□□□□ -0.41
PRKCSH-220ENST00000593104 FOXQ1Q9C009 403 aa12.48□□□□□ -0.41
PRKCSH-220ENST00000593104 NT5C3AQ9H0P0 336 aa12.48□□□□□ -0.41
PRKCSH-220ENST00000593104 CSRNP2Q9H175 543 aa12.48□□□□□ -0.41
PRKCSH-220ENST00000593104 PIDD1Q9HB75 910 aa12.48□□□□□ -0.41
PRKCSH-220ENST00000593104 RXFP1Q9HBX9 757 aa12.48□□□□□ -0.41
PRKCSH-220ENST00000593104 CYP46A1Q9Y6A2 500 aa12.48□□□□□ -0.41
PRKCSH-220ENST00000593104 MYH15Q9Y2K3 1946 aa12.48□□□□□ -0.41
PRKCSH-220ENST00000593104 CASTOR2A6NHX0 329 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 GAS2O43903 313 aaKnown RBP12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 SLITRK3O94933 977 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 CTDNEP1O95476 244 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 GLULP15104 373 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 RFX1P22670 979 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 GLRA2P23416 452 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 ID4P47928 161 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 RTP2Q5QGT7 225 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 NOTUMQ6P988 496 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 DCLK2Q8N568 766 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 CMASQ8NFW8 434 aaPredicted RBP12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 ZNF274Q96GC6 653 aaPredicted RBP12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 FAM20AQ96MK3 541 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 EIF2AK1Q9BQI3 630 aaKnown RBP12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 RTP3Q9BQQ7 232 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 CHST7Q9NS84 486 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 PDRG1Q9NUG6 133 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 IGSF9Q9P2J2 1179 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 EPS15L1Q9UBC2 864 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 PARP2Q9UGN5 583 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 TPCN1Q9ULQ1 816 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 NUMBLQ9Y6R0 609 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 VWA8A3KMH1 1905 aa12.47□□□□□ -0.41
PRKCSH-220ENST00000593104 VPS13AQ96RL7 3174 aa12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 ADAM12O43184 909 aa12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 USO1O60763 962 aaKnown RBP12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 REC8O95072 547 aa12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 LAMP2P13473 410 aa12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 PPP4R3AQ6IN85 833 aa12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 PARM1Q6UWI2 310 aa12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 GRASPQ7Z6J2 395 aaPredicted RBP12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 KIAA2013Q8IYS2 634 aa12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 PIGOQ8TEQ8 1089 aa12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 TCP11Q8WWU5 503 aa12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 RSPH1Q8WYR4 309 aa12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 FGF14Q92915 247 aa12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 RMDN1Q96DB5 314 aa12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 TRIM6Q9C030 488 aaPredicted RBP12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 POLR3FQ9H1D9 316 aaPredicted RBP12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 ZSWIM4Q9H7M6 989 aa12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 POLD4Q9HCU8 107 aa12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 WNT16Q9UBV4 365 aa12.46□□□□□ -0.41
PRKCSH-220ENST00000593104 DCHS1Q96JQ0 3298 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 CCL16O15467 120 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 DKC1O60832 514 aaKnown RBP eCLIP12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 KIF4AO95239 1232 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 LARGE1O95461 756 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 EDN1P05305 212 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 SRFP11831 508 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 ARL2P36404 184 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 HTR4Q13639 388 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 GALNT17Q6IS24 598 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 LILRA6Q6PI73 481 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 OTUD6AQ7L8S5 288 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 CEP57Q86XR8 500 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 NECAB1Q8N987 351 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 COLEC11Q9BWP8 271 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 PRKD2Q9BZL6 878 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 ARHGEF3Q9NR81 526 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 DLGAP2Q9P1A6 1054 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 ADAM28Q9UKQ2 775 aa12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 RIF1Q5UIP0 2472 aaKnown RBP12.45□□□□□ -0.42
PRKCSH-220ENST00000593104 NOTCH4Q99466 2003 aa12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 MED19A0JLT2 244 aaPredicted RBP12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 CARNS1A5YM72 827 aa12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 LRRIQ4A6NIV6 560 aa12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 ANHXE9PGG2 379 aa12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 ASAP2O43150 1006 aa12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 TADA2AO75478 443 aa12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 FDPSP14324 419 aaKnown RBP12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 GCFC2P16383 781 aaKnown RBP12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 LIG1P18858 919 aa12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 RARRES1P49788 294 aa12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 GPC5P78333 572 aa12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 SNW1Q13573 536 aaKnown RBP12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 USP41Q3LFD5 358 aa12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 CPLX2Q6PUV4 134 aaKnown RBP12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 IFNLR1Q8IU57 520 aaPredicted RBP12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 CNNM3Q8NE01 707 aa12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 ITFG1Q8TB96 612 aa12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 BSNDQ8WZ55 320 aa12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 STAMQ92783 540 aa12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 TNFRSF25Q93038 417 aa12.44□□□□□ -0.42
PRKCSH-220ENST00000593104 CLSTN3Q9BQT9 956 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms