RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 KIAA0391O15091 583 aaKnown RBP14.88□□□□□ -0.03
VMP1-210ENST00000589823 TGFB1I1O43294 461 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 STAG3L1P0CL83 205 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 CCDC192P0DO97 292 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 CD44P16070 742 aaKnown RBP14.88□□□□□ -0.03
VMP1-210ENST00000589823 CCNE1P24864 410 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 WDR5P61964 334 aaKnown RBP14.88□□□□□ -0.03
VMP1-210ENST00000589823 TYRO3Q06418 890 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 PAK1Q13153 545 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 HSP90AA2PQ14568 343 aaPredicted RBP14.88□□□□□ -0.03
VMP1-210ENST00000589823 KYAT1Q16773 422 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 DPCR1Q3MIW9 517 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 ZSCAN23Q3MJ62 389 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 CENPPQ6IPU0 288 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 ECHDC2Q86YB7 292 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 RNF169Q8NCN4 708 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 TET1Q8NFU7 2136 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 NELFBQ8WX92 580 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 P2RX5Q93086 422 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 PGBD4Q96DM1 585 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 GDF15Q99988 308 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 MSTO1Q9BUK6 570 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 CCDC94Q9BW85 323 aaPredicted RBP14.88□□□□□ -0.03
VMP1-210ENST00000589823 PCIF1Q9H4Z3 704 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 AGO2Q9UKV8 859 aaKnown RBP14.88□□□□□ -0.03
VMP1-210ENST00000589823 LRFN2Q9ULH4 789 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 CTNND2Q9UQB3 1225 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 TRAF3IP3Q9Y228 551 aa14.88□□□□□ -0.03
VMP1-210ENST00000589823 BICDL2A1A5D9 508 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 CLIC2O15247 247 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 OGTO15294 1046 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 ZNF623O75123 536 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 EOMESO95936 686 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 LDHAP00338 332 aaKnown RBP14.87□□□□□ -0.03
VMP1-210ENST00000589823 ITGA4P13612 1032 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 ADSSP30520 456 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 FAM189BP81408 668 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 LRRC63Q05C16 580 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 CT47A1Q5JQC4 288 aaPredicted RBP14.87□□□□□ -0.03
VMP1-210ENST00000589823 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.87□□□□□ -0.033e-6■■■■□ 19.8
VMP1-210ENST00000589823 NPAS4Q8IUM7 802 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 C12orf56Q8IXR9 622 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 THNSL1Q8IYQ7 743 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 CBWD1Q9BRT8 395 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 APOL6Q9BWW8 343 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 SEMA6BQ9H3T3 888 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 ELAC1Q9H777 363 aaKnown RBP14.87□□□□□ -0.03
VMP1-210ENST00000589823 IPPQ9Y573 584 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 PCDHB7Q9Y5E2 793 aa14.87□□□□□ -0.03
VMP1-210ENST00000589823 NR3C1P04150 777 aa14.86□□□□□ -0.03
VMP1-210ENST00000589823 RPL13P26373 211 aaKnown RBP14.86□□□□□ -0.03
VMP1-210ENST00000589823 GRM5P41594 1212 aa14.86□□□□□ -0.03
VMP1-210ENST00000589823 CYP2J2P51589 502 aa14.86□□□□□ -0.03
VMP1-210ENST00000589823 YARSP54577 528 aaKnown RBP14.86□□□□□ -0.03
VMP1-210ENST00000589823 EDRF1Q3B7T1 1238 aa14.86□□□□□ -0.03
VMP1-210ENST00000589823 MRPL10Q7Z7H8 261 aaKnown RBP14.86□□□□□ -0.03
VMP1-210ENST00000589823 SMG8Q8ND04 991 aaKnown RBP14.86□□□□□ -0.03
VMP1-210ENST00000589823 NOC3LQ8WTT2 800 aaKnown RBP14.86□□□□□ -0.03
VMP1-210ENST00000589823 SAAL1Q96ER3 474 aa14.86□□□□□ -0.03
VMP1-210ENST00000589823 RNPC3Q96LT9 517 aaKnown RBP14.86□□□□□ -0.03
VMP1-210ENST00000589823 HAPLN2Q9GZV7 340 aa14.86□□□□□ -0.03
VMP1-210ENST00000589823 GZF1Q9H116 711 aaPredicted RBP14.86□□□□□ -0.03
VMP1-210ENST00000589823 NXF3Q9H4D5 531 aaKnown RBP14.86□□□□□ -0.03
VMP1-210ENST00000589823 UBN1Q9NPG3 1134 aa14.86□□□□□ -0.03
VMP1-210ENST00000589823 TMEM161AQ9NX61 479 aa14.86□□□□□ -0.03
VMP1-210ENST00000589823 SNTG2Q9NY99 539 aa14.86□□□□□ -0.03
VMP1-210ENST00000589823 HSPBP1Q9NZL4 362 aa14.86□□□□□ -0.03
VMP1-210ENST00000589823 PARP2Q9UGN5 583 aa14.86□□□□□ -0.03
VMP1-210ENST00000589823 RWDD2AQ9UIY3 292 aa14.86□□□□□ -0.03
VMP1-210ENST00000589823 HES2Q9Y543 173 aa14.86□□□□□ -0.03
VMP1-210ENST00000589823 SLC4A7Q9Y6M7 1214 aa14.86□□□□□ -0.03
VMP1-210ENST00000589823 HOXA2O43364 376 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 UPP2O95045 317 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 CLTAP09496 248 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 ERCC5P28715 1186 aaPredicted RBP14.85□□□□□ -0.03
VMP1-210ENST00000589823 BMP8BP34820 402 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 STX17P56962 302 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 OSTNP61366 133 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 DEFB103AP81534 67 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 MYBPC2Q14324 1141 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 SHHQ15465 462 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 NFIL3Q16649 462 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 ZCWPW2Q504Y3 356 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 ANKRD40Q6AI12 368 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 SLC9A9Q8IVB4 645 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 GPD1LQ8N335 351 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 CEP120Q8N960 986 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 XXYLT1Q8NBI6 393 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 TOP1MTQ969P6 601 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 ACAP3Q96P50 834 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 SLC9A7Q96T83 725 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 FAM213AQ9BRX8 229 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 NAT10Q9H0A0 1025 aaKnown RBP14.85□□□□□ -0.03
VMP1-210ENST00000589823 KIAA1586Q9HCI6 787 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 TOPORSQ9NS56 1045 aaPredicted RBP14.85□□□□□ -0.03
VMP1-210ENST00000589823 MICAL3Q7RTP6 2002 aa14.85□□□□□ -0.03
VMP1-210ENST00000589823 GOLGA8IPA6NC78 632 aa14.84□□□□□ -0.03
VMP1-210ENST00000589823 TRIM49BA6NDI0 452 aa14.84□□□□□ -0.03
VMP1-210ENST00000589823 GOLGA8JA6NMD2 632 aa14.84□□□□□ -0.03
VMP1-210ENST00000589823 CETN3O15182 167 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms